RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 ANXA11P50995 505 aaKnown RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 HKDC1Q2TB90 917 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 IDNKQ5T6J7 187 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 FUNDC1Q8IVP5 155 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 SLCO4A1Q96BD0 722 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 TEFMQ96QE5 360 aaKnown RBP13.87□□□□□ -0.19
RTF1-201ENST00000389629 BBS4Q96RK4 519 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 PAAF1Q9BRP4 392 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 AHSPQ9NZD4 102 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 CD300AQ9UGN4 299 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 GTF2IRD1Q9UHL9 959 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 PCDHB14Q9Y5E9 798 aa13.87□□□□□ -0.19
RTF1-201ENST00000389629 CHURC1-FNTBB4DL54 471 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 TLL1O43897 1013 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 C1QAP02745 245 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 IFNGR2P38484 337 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 SMAD3P84022 425 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 ABRAXAS2Q15018 415 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 IKBIPQ70UQ0 350 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 DCP2Q8IU60 420 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 CNTN4Q8IWV2 1026 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 PELI3Q8N2H9 469 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 BPIFB1Q8TDL5 484 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 KCTD7Q96MP8 289 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 DUSP26Q9BV47 211 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 OR51E2Q9H255 320 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 BRD9Q9H8M2 597 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 BEX1Q9HBH7 125 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 POPDC3Q9HBV1 291 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 TREX1Q9NSU2 369 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 SLC25A13Q9UJS0 675 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 MPZL2O60487 215 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 ALPIP09923 528 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 C10orf62Q5T681 223 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 KAT2AQ92830 837 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 SMURF1Q9HCE7 757 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 PRDM8Q9NQV8 689 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 MIOSQ9NXC5 875 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 NFKBIL1Q9UBC1 381 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 SEC14L3Q9UDX4 400 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 PRG2P13727 222 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 ELAVL2Q12926 359 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 GRIK2Q13002 908 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 NAE1Q13564 534 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 PIK3R6Q5UE93 754 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 LYPLAL1Q5VWZ2 237 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 TBPL2Q6SJ96 375 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 TMEM40Q8WWA1 233 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 MAELQ96JY0 434 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 PFDN2Q9UHV9 154 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 CMAHPQ9Y471 501 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 ISM1B1AKI9 464 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 CA5AP35218 305 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 KCNQ1P51787 676 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 TARDBPQ13148 414 aaKnown RBP eCLIP13.86□□□□□ -0.199e-7■■■□□ 17.6
RTF1-201ENST00000389629 OXA1LQ15070 435 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 C18orf21Q32NC0 220 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 C1QTNF12Q5T7M4 302 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 AGAP6Q5VW22 663 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 MACC1Q6ZN28 852 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 SPRED1Q7Z699 444 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 XAGE5Q8WWM1 108 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 SGCDQ92629 289 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 AGAP4Q96P64 663 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 FCRL4Q96PJ5 515 aa13.86□□□□□ -0.19
RTF1-201ENST00000389629 DPH2Q9BQC3 489 aaPredicted RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 POLR2J3Q9H1A7 115 aaKnown RBP13.86□□□□□ -0.19
RTF1-201ENST00000389629 A0A0D9SEW6 157 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 UBFD1O14562 309 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 PLD2O14939 933 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ALPLP05186 524 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 CENPAP49450 140 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 C2orf80Q0P641 193 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 RCAN2Q14206 197 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 STEAP3Q658P3 488 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 DTX3Q8N9I9 347 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 FAM83FQ8NEG4 500 aaPredicted RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 NETO1Q8TDF5 533 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ABCB8Q9NUT2 735 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 VAPAQ9P0L0 249 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 GPR45Q9Y5Y3 372 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 APOL3O95236 402 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 RPLP2P05387 115 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 FAM163BP0C2L3 166 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 CASP3P42574 277 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 CDH4P55283 916 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 SMIM11AP58511 58 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ST8SIA6P61647 398 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 UAP1L1Q3KQV9 507 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 OR5AK3PQ8NH89 298 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 FUBP1Q96AE4 644 aaKnown RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 REPS1Q96D71 796 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 TMEM248Q9NWD8 314 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 FBXO9Q9UK97 447 aaPredicted RBP13.85□□□□□ -0.19
RTF1-201ENST00000389629 RIMKLBQ9ULI2 386 aa13.85□□□□□ -0.19
RTF1-201ENST00000389629 ABT1Q9ULW3 272 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms