RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 POLR3HQ9Y535 204 aaPredicted RBP25.8■■□□□ 1.72
MSX1-201ENST00000382723 SDK1Q7Z5N4 2213 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 IGKV1-8A0A0C4DH67 115 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 LMO7DNF2Z398 122 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 ADSLP30566 484 aaPredicted RBP25.8■■□□□ 1.72
MSX1-201ENST00000382723 CSTF3Q12996 717 aaKnown RBP25.8■■□□□ 1.72
MSX1-201ENST00000382723 AGKQ53H12 422 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 IL23RQ5VWK5 629 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 TMIGD1Q6UXZ0 262 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 MIER2Q8N344 545 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 OR9I1Q8NGQ6 314 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 AIF1LQ9BQI0 150 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 CCDC167Q9P0B6 97 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 GPR45Q9Y5Y3 372 aa25.8■■□□□ 1.72
MSX1-201ENST00000382723 FEZF1A0PJY2 475 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 SERTM1A2A2V5 107 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 RSL1D1O76021 490 aaKnown RBP25.79■■□□□ 1.72
MSX1-201ENST00000382723 POLR2CP19387 275 aaPredicted RBP25.79■■□□□ 1.72
MSX1-201ENST00000382723 GPX3P22352 226 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 ZNF33BQ06732 778 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 GK5Q6ZS86 529 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 SNX32Q86XE0 403 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 UBE2E3Q969T4 207 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 SLC45A3Q96JT2 553 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 ERVMER34-1Q9H9K5 563 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 MRGBPQ9NV56 204 aa25.79■■□□□ 1.72
MSX1-201ENST00000382723 SP9P0CG40 484 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 RPS13P62277 151 aaKnown RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 BNIP3Q12983 259 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 TMEM26Q6ZUK4 368 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ZFAND4Q86XD8 727 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 SLC7A6OSQ96CW6 309 aaPredicted RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 SLC6A20Q9NP91 592 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 FSCN3Q9NQT6 498 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ZSCAN32Q9NX65 697 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 KLHL20Q9Y2M5 609 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ARHGEF17Q96PE2 2063 aaPredicted RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 GSAPA4D1B5 854 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 CXCR2P25025 360 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 CMPK1P30085 196 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 CSNK1G2P78368 415 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ABATP80404 500 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ANGPT1Q15389 498 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 KIAA1614Q5VZ46 1190 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 RINLQ6ZS11 566 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 BMP8AQ7Z5Y6 402 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 SYT12Q8IV01 421 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 PLD3Q8IV08 490 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ARL14Q8N4G2 192 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 KIF2BQ8N4N8 673 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 OR4K1Q8NGD4 311 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 APIPQ96GX9 242 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 ZC3H10Q96K80 434 aaKnown RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 ELF4Q99607 663 aaPredicted RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 TBC1D10AQ9BXI6 508 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 SDR39U1Q9NRG7 319 aaPredicted RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 NOP53Q9NZM5 478 aaKnown RBP25.78■■□□□ 1.72
MSX1-201ENST00000382723 VPS29Q9UBQ0 182 aa25.78■■□□□ 1.72
MSX1-201ENST00000382723 CCNDBP1O95273 360 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 ETHE1O95571 254 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 G6PDP11413 515 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 EZRP15311 586 aaKnown RBP25.77■■□□□ 1.72
MSX1-201ENST00000382723 PRDX6P30041 224 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 REEP5Q00765 189 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 BIRC2Q13490 618 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 CYLC2Q14093 348 aaPredicted RBP25.77■■□□□ 1.72
MSX1-201ENST00000382723 SIM2Q14190 667 aaPredicted RBP25.77■■□□□ 1.72
MSX1-201ENST00000382723 SLC22A18Q96BI1 424 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 KLHL29Q96CT2 875 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 CMTM7Q96FZ5 175 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 DPH7Q9BTV6 452 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 BRF2Q9HAW0 419 aa25.77■■□□□ 1.72
MSX1-201ENST00000382723 EIF3LQ9Y262 564 aaKnown RBP25.77■■□□□ 1.72
MSX1-201ENST00000382723 NOBOXO60393 691 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 NRP2O60462 931 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 THRAP10827 490 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 CNR2P34972 360 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 RASSF2P50749 326 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 MAD2L1Q13257 205 aaPredicted RBP25.76■■□□□ 1.72
MSX1-201ENST00000382723 KIR2DS3Q14952 304 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 PRR23BQ6ZRT6 265 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 RBM12BQ8IXT5 1001 aaKnown RBP25.76■■□□□ 1.72
MSX1-201ENST00000382723 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.76■■□□□ 1.72
MSX1-201ENST00000382723 SDR16C5Q8N3Y7 309 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 FBXO27Q8NI29 283 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 DMRT3Q9NQL9 472 aa25.76■■□□□ 1.72
MSX1-201ENST00000382723 B2RBV5 119 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 C9JVG2 144 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 PPM1DO15297 605 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 HNRNPCL1O60812 293 aaKnown RBP25.76■■□□□ 1.71
MSX1-201ENST00000382723 TGFB1P01137 390 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 CFIP05156 583 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 HSD3B1P14060 373 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 HSD3B2P26439 372 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 MXRA7P84157 204 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 KIAA0040Q15053 153 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 TRIM73Q86UV7 250 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 RP9Q8TA86 221 aaKnown RBP25.76■■□□□ 1.71
MSX1-201ENST00000382723 APOLD1Q96LR9 279 aa25.76■■□□□ 1.71
MSX1-201ENST00000382723 BRINP2Q9C0B6 783 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms