RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 CREB3L2Q70SY1 520 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 TMC8Q8IU68 726 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 CAMKK1Q8N5S9 505 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 LINGO1Q96FE5 620 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 C1orf74Q96LT6 269 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 ZSCAN5AQ9BUG6 496 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 GABARAPL3Q9BY60 117 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 AASDHPPTQ9NRN7 309 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 SNTG1Q9NSN8 517 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 ZNF226Q9NYT6 803 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 NUP50Q9UKX7 468 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 TIMM13Q9Y5L4 95 aaPredicted RBP14.54□□□□□ -0.08
CTNS-202ENST00000381870 TSC22D2O75157 780 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 NIPSNAP2O75323 286 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 C1QBP02746 253 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 SEMG1P04279 462 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 HAPLN1P10915 354 aaPredicted RBP14.54□□□□□ -0.08
CTNS-202ENST00000381870 HOXC13P31276 330 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PNPLA4P41247 253 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 RENBPP51606 427 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 KCNQ1P51787 676 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PSPHP78330 225 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 C5orf22Q49AR2 442 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 MARC1Q5VT66 337 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 NADSYN1Q6IA69 706 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 FAM171BQ6P995 826 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 C19orf48Q6RUI8 117 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 FAM131AQ6UXB0 335 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 CCDC149Q6ZUS6 474 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 EFHBQ8N7U6 833 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PEX13Q92968 403 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PMEPA1Q969W9 287 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 HSH2DQ96JZ2 352 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 PPP3R2Q96LZ3 170 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 EIF3KQ9UBQ5 218 aaKnown RBP14.54□□□□□ -0.08
CTNS-202ENST00000381870 CPA4Q9UI42 421 aa14.54□□□□□ -0.08
CTNS-202ENST00000381870 C19orf81C9J6K1 198 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 HAS3O00219 553 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 OR1I1O60431 355 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 PDGFAP04085 211 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 LGALS2P05162 132 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 OGNP20774 298 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 HLA-DMAP28067 261 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 WEE1P30291 646 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 CSTF2P33240 577 aaKnown RBP eCLIP14.53□□□□□ -0.08
CTNS-202ENST00000381870 VEPH1Q14D04 833 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 PTPRNQ16849 979 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 TATDN3Q17R31 274 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 ZNF605Q86T29 641 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 TOP6BLQ8N6T0 577 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 AGBL3Q8NEM8 1001 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 B3GNT7Q8NFL0 401 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 TOR1AIP2Q8NFQ8 470 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 TMEM184CQ9NVA4 438 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 MS4A12Q9NXJ0 267 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 KLHL21Q9UJP4 597 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 LOC285556D6RIA3 1793 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 WNT9AO14904 365 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 PLA2G10O15496 165 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 PDPK1O15530 556 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 C9P02748 559 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 HOXB6P17509 224 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 SSTR4P31391 388 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 ABHD18Q0P651 414 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 QPRTQ15274 297 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 SLC39A12Q504Y0 691 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 SAXO2Q658L1 398 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 ZNF367Q7RTV3 350 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 NKAPQ8N5F7 415 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 RTL3Q8N8U3 475 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 ARRDC2Q8TBH0 407 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 BRSK1Q8TDC3 778 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 HMCESQ96FZ2 354 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 NIPAL2Q9H841 368 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 AP3M1Q9Y2T2 418 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 TNPO3Q9Y5L0 923 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 ALG5Q9Y673 324 aa14.53□□□□□ -0.08
CTNS-202ENST00000381870 CFAP20Q9Y6A4 193 aaKnown RBP14.53□□□□□ -0.08
CTNS-202ENST00000381870 LOC285095A0A1B0GVY8 99 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 E9PAM4 449 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 SCAMP3O14828 347 aaKnown RBP14.52□□□□□ -0.08
CTNS-202ENST00000381870 WDR47O94967 919 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 ALAS2P22557 587 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 PTPN6P29350 595 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 TNFAIP1Q13829 316 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 GTF2H2Q13888 395 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 DMC1Q14565 340 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 GPR19Q15760 415 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 TIMM50Q3ZCQ8 353 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 GLYR1Q49A26 553 aaPredicted RBP14.52□□□□□ -0.08
CTNS-202ENST00000381870 OR4F3Q6IEY1 312 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 PDE12Q6L8Q7 609 aaKnown RBP14.52□□□□□ -0.08
CTNS-202ENST00000381870 GTF2H2CQ6P1K8 395 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 TMEM132CQ8N3T6 1108 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 CRELD1Q96HD1 420 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 CDKN2AIPNLQ96HQ2 116 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 IPPKQ9H8X2 491 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 UCKL1Q9NWZ5 548 aa14.52□□□□□ -0.08
CTNS-202ENST00000381870 B3GNT2Q9NY97 397 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms