RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 AGAP4Q96P64 663 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 LHPPQ9H008 270 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 CCDC68Q9H2F9 335 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 XAB2Q9HCS7 855 aaKnown RBP13.47□□□□□ -0.25
SHOX-202ENST00000381575 ENAMQ9NRM1 1142 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 MRPS2Q9Y399 296 aaKnown RBP13.47□□□□□ -0.25
SHOX-202ENST00000381575 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
SHOX-202ENST00000381575 A0A0A6YYC8 382 aaPredicted RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 E7ENX8 843 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 I3L1I5 382 aaPredicted RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 MAP2K7O14733 419 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 KLHL41O60662 606 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 VPS26AO75436 327 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 HAUS5O94927 633 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 VARSP26640 1264 aaKnown RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 MAT1AQ00266 395 aaKnown RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 TAP2Q03519 686 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 HSP90AA5PQ58FG0 334 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 THEMIS2Q5TEJ8 643 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 ZNF425Q6IV72 752 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 PRMT9Q6P2P2 845 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 AMER3Q8N944 861 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 MCUQ8NE86 351 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 CATSPER1Q8NEC5 780 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 CD200R1Q8TD46 325 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 PPP4R1Q8TF05 950 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 MMABQ96EY8 250 aaPredicted RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 NDNQ99608 321 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 IARS2Q9NSE4 1012 aaKnown RBP13.46□□□□□ -0.25
SHOX-202ENST00000381575 SH2B3Q9UQQ2 575 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 VPS9D1Q9Y2B5 631 aa13.46□□□□□ -0.25
SHOX-202ENST00000381575 ABCA12Q86UK0 2595 aa13.46□□□□□ -0.26
SHOX-202ENST00000381575 IDSB3KWA1 339 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 HPP00738 406 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 F10P00742 488 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 COX6A1P12074 109 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 MLNP12872 115 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 IMPA1P29218 277 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 MAGEA3P43357 314 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 EFNA3P52797 238 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 EMP2P54851 167 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 PRDX1Q06830 199 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 CDC16Q13042 620 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 DSG2Q14126 1118 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ARHGAP19Q14CB8 494 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 CYHR1Q6ZMK1 362 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 UBE2R2Q712K3 238 aaPredicted RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 SIRT6Q8N6T7 355 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 GRHL3Q8TE85 626 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ASB11Q8WXH4 323 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 KCNJ9Q92806 393 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 RERGQ96A58 199 aaPredicted RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 NACC2Q96BF6 587 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 SIGLEC10Q96LC7 697 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 EPS8L2Q9H6S3 715 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 PLA2G3Q9NZ20 509 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 SLC17A6Q9P2U8 582 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ADAMTS6Q9UKP5 1117 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 FBXO5Q9UKT4 447 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 DHRS7Q9Y394 339 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 IGLV3-12A0A075B6K2 115 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 H7BY64 318 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 FOXS1O43638 330 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 JRKO75564 520 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 CLDN1O95832 211 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 LDLRP01130 860 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 EZRP15311 586 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 CARSP49589 748 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 PGGT1BP53609 377 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 ELOAQ14241 798 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 ZNF169Q14929 603 aaPredicted RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 NAA25Q14CX7 972 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 CYP1B1Q16678 543 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ATG9BQ674R7 924 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ZNF787Q6DD87 383 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 IGFL2Q6UWQ7 119 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ISLR2Q6UXK2 745 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 NEK10Q6ZWH5 1172 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 PRSS41Q7RTY9 318 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 LRRC56Q8IYG6 542 aaPredicted RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 ARHGEF39Q8N4T4 335 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 NAT8LQ8N9F0 302 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 BRIX1Q8TDN6 353 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 ALKBH8Q96BT7 664 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 PBKQ96KB5 322 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 PRAP1Q96NZ9 151 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 AARSD1Q9BTE6 412 aaKnown RBP13.45□□□□□ -0.26
SHOX-202ENST00000381575 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 JRKLQ9Y4A0 524 aa13.45□□□□□ -0.26
SHOX-202ENST00000381575 NSG1A0A0A6YYJ2 146 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms