RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ING5Q8WYH8 240 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 SCAMP4Q969E2 229 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 VMP1Q96GC9 406 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 NTMT1Q9BV86 223 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 BBS2Q9BXC9 721 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 ZBTB20Q9HC78 741 aaPredicted RBP15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 ACOT13Q9NPJ3 140 aa15.77■□□□□ 0.11
NKX3-1-201ENST00000380871 TTC34A8MYJ7 566 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 M0QX08 132 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ERN1O75460 977 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 LAG3P18627 525 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 WDR5P61964 334 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 CREMQ03060 361 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 TSTA3Q13630 321 aaPredicted RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ATP13A5Q4VNC0 1218 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PRSS36Q5K4E3 855 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 KDM4DQ6B0I6 523 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 CRTC1Q6UUV9 634 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 OR2AP1Q8NGE2 309 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PSMA8Q8TAA3 256 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 SLC35B4Q969S0 331 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 SLIRPQ9GZT3 109 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 MIR1-1HGQ9H1L0 117 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 AASDHPPTQ9NRN7 309 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ARL15Q9NXU5 204 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 TRPS1Q9UHF7 1281 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PCDHGB1Q9Y5G3 927 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 CLDN9O95484 217 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 SRCP12931 536 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ACRV1P26436 265 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ACOX1Q15067 660 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 MPPE1Q53F39 396 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 BEND7Q8N7W2 519 aaPredicted RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 GIN1Q9NXP7 522 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 OGDHLQ9ULD0 1010 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 SAMHD1Q9Y3Z3 626 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PCDHGA12O60330 932 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 KDM1AO60341 852 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PRAMEF4O60810 478 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 MAGP20916 626 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 AQP1P29972 269 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 CLDN8P56748 225 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 HIST2H2ACQ16777 129 aaPredicted RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 DGUOKQ16854 277 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 PRAMEF9Q5VWM5 478 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 DDX53Q86TM3 631 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 ATG16L2Q8NAA4 619 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 IL1RAPQ9NPH3 570 aa15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 THG1LQ9NWX6 298 aaKnown RBP15.76■□□□□ 0.11
NKX3-1-201ENST00000380871 SPAM1P38567 509 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ZC3H12BQ5HYM0 836 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 SYT6Q5T7P8 510 aaPredicted RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 CERS6Q6ZMG9 384 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 Q6ZNB5 142 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ANKRD33Q7Z3H0 272 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 CLECL1Q8IZS7 167 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 LGALS12Q96DT0 336 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ATG10Q9H0Y0 220 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 KIF17Q9P2E2 1029 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 HCFC2Q9Y5Z7 792 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 HIDE1A8MVS5 230 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 WBP4O75554 376 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 FKBP9O95302 570 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 EFEMP2O95967 443 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 CLTBP09497 229 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 NUDT7P0C024 238 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 CD36P16671 472 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 JUNDP17535 347 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 TGFBR2P37173 567 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 RPIAP49247 311 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 MAD2L1BPQ15013 274 aaPredicted RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 RFX4Q33E94 735 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 SOWAHCQ53LP3 525 aaPredicted RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 PDE12Q6L8Q7 609 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 PLEKHG7Q6ZR37 379 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 FKBP9P1Q75LS8 142 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ELMOD1Q8N336 334 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 HTRA1Q92743 480 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 TPD52L3Q96J77 140 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ASPSCR1Q9BZE9 553 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 REXO4Q9GZR2 422 aaKnown RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 ELOVL6Q9H5J4 265 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 NECTIN3Q9NQS3 549 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 SCHIP1Q9P0W5 487 aaPredicted RBP15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 TBX21Q9UL17 535 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 TPRKBQ9Y3C4 175 aa15.75■□□□□ 0.11
NKX3-1-201ENST00000380871 WNT9AO14904 365 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 YY2O15391 372 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 RGS10O43665 173 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 CNOT3O75175 753 aaKnown RBP15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 VIPP01282 170 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 ENGP17813 658 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 ITPKAP23677 461 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 C21orf33P30042 268 aaPredicted RBP15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 ST13P50502 369 aaKnown RBP15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 CASP9P55211 416 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 ABHD18Q0P651 414 aa15.74■□□□□ 0.11
NKX3-1-201ENST00000380871 IL18R1Q13478 541 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms