RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 MAGEB3O15480 346 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 OR1F1O43749 312 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 GJB5O95377 273 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 DGKEP52429 567 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 GPRC6AQ5T6X5 926 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 SCD5Q86SK9 330 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CHPFQ8IZ52 775 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CHCHD4Q8N4Q1 142 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 RFKQ969G6 155 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CITED4Q96RK1 184 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MYOCQ99972 504 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 RIOK2Q9BVS4 552 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 PITPNM1O00562 1244 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CCL16O15467 120 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 PDPK1O15530 556 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 ADH1CP00326 375 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MT-ND2P03891 347 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 GKP32189 559 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 DSTNP60981 165 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 RGS1Q08116 209 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 ZNHIT3Q15649 155 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 C5orf22Q49AR2 442 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MARCH8Q5T0T0 291 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MFSD2AQ8NA29 543 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 SRFBP1Q8NEF9 429 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 KLHL6Q8WZ60 621 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 PTPN18Q99952 460 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 PMF1-BGLAPU3KQ54 211 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 C7orf72A4D263 438 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 SLC1A7O00341 560 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 WNT9AO14904 365 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 LAMP2P13473 410 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CD247P20963 164 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 SLC5A2P31639 672 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MAP2K4P45985 399 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 XKP51811 444 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CD47Q08722 323 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CRHR2Q13324 411 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 PON2Q15165 354 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CRB2Q5IJ48 1285 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 KCTD11Q693B1 232 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 ENPP6Q6UWR7 440 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 GDPD4Q6W3E5 623 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 CMTM8Q8IZV2 173 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 LGALS12Q96DT0 336 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 FCRL4Q96PJ5 515 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 GAS2L1Q99501 681 aaPredicted RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 MMP27Q9H306 513 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 TBC1D17Q9HA65 648 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 ARNT2Q9HBZ2 717 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 AGPAT4Q9NRZ5 378 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 COMMD3Q9UBI1 195 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 WDR37Q9Y2I8 494 aa12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 OAS3Q9Y6K5 1087 aaKnown RBP12.36□□□□□ -0.43
DNMT3A-204ENST00000380756 URADA6NGE7 173 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 C8AP07357 584 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 GGT1P19440 569 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 CTNNB1P35222 781 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 RCVRNP35243 200 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SKP1P63208 163 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 RCAN2Q14206 197 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 TSTQ16762 297 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 TMEM236Q5W0B7 351 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 ANKRD26P1Q6NSI1 321 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 TUBA3EQ6PEY2 450 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 Q6ZVU0 165 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 PAQR9Q6ZVX9 377 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 IKBIPQ70UQ0 350 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 LSMEM2Q8N112 164 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SCML4Q8N228 414 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 KAT2AQ92830 837 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 OR2AG1Q9H205 316 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 CEPT1Q9Y6K0 416 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 H3BMQ9 156 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 LSM1O15116 133 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 GSTM2P28161 218 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 LBX1P52954 281 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 CXorf57Q6NSI4 855 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 IFNL1Q8IU54 200 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 CHERPQ8IWX8 916 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 GJD3Q8N144 294 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SLC9A6Q92581 669 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SLC35G5Q96KT7 338 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 COG8Q96MW5 612 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 NKIRAS2Q9NYR9 191 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 MKLN1Q9UL63 735 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 OARD1Q9Y530 152 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 TOGARAM1Q9Y4F4 1720 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 ZNF701M0R085 212 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 LDB2O43679 373 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 OR5F1O95221 314 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SRPRAP08240 638 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 CSTF2P33240 577 aaKnown RBP eCLIP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 PIK3CBP42338 1070 aa12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 RPS3AP61247 264 aaKnown RBP12.35□□□□□ -0.43
DNMT3A-204ENST00000380756 RPP38P78345 283 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms