RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 C16orf46Q6P387 395 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 NXPE4Q6UWF7 544 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 LRRC70Q7Z2Q7 622 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CROCCP2Q86T23 111 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 ZFAND4Q86XD8 727 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 DTX1Q86Y01 620 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 N4BP2L2Q92802 583 aaPredicted RBP17.95■□□□□ 0.46
SSU72-203ENST00000378725 PELI2Q9HAT8 420 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 CPSF2Q9P2I0 782 aaKnown RBP17.95■□□□□ 0.46
SSU72-203ENST00000378725 PCDHB3Q9Y5E6 796 aa17.95■□□□□ 0.46
SSU72-203ENST00000378725 LOC105369274A0A096LPK9 316 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 LOC102723532A0A0G2JNH3 316 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 E7EQ34 232 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 STMND1H3BQB6 276 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 STX16-NPEPL1H3BU86 382 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 K7EPI3 171 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 TAF4O00268 1085 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 STX16O14662 325 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 HAT1O14929 419 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 GLRA3O75311 464 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 SCRG1O75711 98 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 OR2B3O76000 313 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 STK17BO94768 372 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 GNAZP19086 355 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 PCBP4P57723 403 aaKnown RBP17.94■□□□□ 0.46
SSU72-203ENST00000378725 PCDH1Q08174 1060 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 MAP7Q14244 749 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 KRT71Q3SY84 523 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 TCTE1Q5JU00 501 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 PRAMEF17Q5VTA0 474 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 TLDC1Q6P9B6 456 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 SLCO4C1Q6ZQN7 724 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 ADCK2Q7Z695 626 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 GPR135Q8IZ08 494 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 OR4N4Q8N0Y3 316 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 THAP11Q96EK4 314 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 SELENOSQ9BQE4 189 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 ULBP3Q9BZM4 244 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 SYNPO2LQ9H987 977 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 MKS1Q9NXB0 559 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 EMCNQ9ULC0 261 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 GRID1Q9ULK0 1009 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 TNPO3Q9Y5L0 923 aaKnown RBP17.94■□□□□ 0.46
SSU72-203ENST00000378725 AP1M2Q9Y6Q5 423 aa17.94■□□□□ 0.46
SSU72-203ENST00000378725 AKAP13Q12802 2813 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 FITM1A5D6W6 292 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 H0YGG7 62 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 CCNT2O60583 730 aaKnown RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 SMIM24O75264 130 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 KIAA0754O94854 1291 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 C1GALT1C1LP0DN25 315 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 H2AFXP16104 143 aaPredicted RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 EPORP19235 508 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 GCGRP47871 477 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 ARF3P61204 181 aaPredicted RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 RPS15AP62244 130 aaKnown RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 PDK4Q16654 411 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 TNFAIP8L3Q5GJ75 292 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 CEP85LQ5SZL2 805 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 ATG9BQ674R7 924 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 TIPARPQ7Z3E1 657 aaKnown RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 PROSER1Q86XN7 944 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 TMEM126BQ8IUX1 230 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 C4orf33Q8N1A6 199 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 PTGR2Q8N8N7 351 aaPredicted RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 ZNF248Q8NDW4 579 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 ZCCHC14Q8WYQ9 949 aaKnown RBP17.93■□□□□ 0.46
SSU72-203ENST00000378725 LRFN5Q96NI6 719 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 EHD1Q9H4M9 534 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 OPTCQ9UBM4 332 aa17.93■□□□□ 0.46
SSU72-203ENST00000378725 COPEO14579 308 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 RGS16O15492 202 aaPredicted RBP17.92■□□□□ 0.46
SSU72-203ENST00000378725 ZNF749O43361 778 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 LCMT2O60294 686 aaKnown RBP17.92■□□□□ 0.46
SSU72-203ENST00000378725 PRAMEF4O60810 478 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 NTRK1P04629 796 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 LIPCP11150 499 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 TAC1P20366 129 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 GRK3P35626 688 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 EIF2S3P41091 472 aaKnown RBP17.92■□□□□ 0.46
SSU72-203ENST00000378725 CASP2P42575 452 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 VSX2P58304 361 aaPredicted RBP17.92■□□□□ 0.46
SSU72-203ENST00000378725 NFKB2Q00653 900 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 E2F2Q14209 437 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 CCDC153Q494R4 210 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 WASHC2DQ5SRD0 308 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 PRAMEF9Q5VWM5 478 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 PLD3Q8IV08 490 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 BANPQ8N9N5 519 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 SNX31Q8N9S9 440 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 SLC38A9Q8NBW4 561 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 PHF21BQ96EK2 531 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 WDR34Q96EX3 536 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 DPH1Q9BZG8 443 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 PCM1Q15154 2024 aa17.92■□□□□ 0.46
SSU72-203ENST00000378725 TRBC2A0A5B9 178 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 FEZF1A0PJY2 475 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 LRRC14BA6NHZ5 514 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 A8MT66 165 aa17.91■□□□□ 0.46
SSU72-203ENST00000378725 E2F3O00716 465 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms