RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TMBIM1Q969X1 311 aa14.63□□□□□ -0.07
NPHP4-201ENST00000378156 NSUN3Q9H649 340 aaKnown RBP14.63□□□□□ -0.07
NPHP4-201ENST00000378156 MARCH4Q9P2E8 410 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-201ENST00000378156 A0A0X1KG70 313 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 A0A1W2PRB8 838 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 REM1O75628 298 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PTCHD3Q3KNS1 767 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 CMTR2Q8IYT2 770 aaKnown RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 TTC29Q8NA56 475 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 ZMIZ2Q8NF64 920 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 METTL21AQ8WXB1 218 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 DHRS7Q9Y394 339 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PTGDR2Q9Y5Y4 395 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 MYH4Q9Y623 1939 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 A0A0G2JN53 185 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 STC2O76061 302 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 SORBS2O94875 1100 aaKnown RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PGLSO95336 258 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 C9P02748 559 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 CYP11A1P05108 521 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 HLA-EP13747 358 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 SEMA3AQ14563 771 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PEX13Q92968 403 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 ZNF641Q96N77 438 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 LOC730098B7Z3J9 87 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 TOR1BO14657 336 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 DGKEP52429 567 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 CASP9P55211 416 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PTGES3Q15185 160 aaKnown RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 TGFBIQ15582 683 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 RPTNQ6XPR3 784 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PACRGLQ8N7B6 248 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 SMPDL3AQ92484 453 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 AP2A2O94973 939 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 POU2F1P14859 743 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 PTX3P26022 381 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-201ENST00000378156 ARSDP51689 593 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 GRB7Q14451 532 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 NUDT13Q86X67 352 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 SLC29A3Q9BZD2 475 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 SPHK2Q9NRA0 654 aa14.62□□□□□ -0.07
NPHP4-201ENST00000378156 USP54Q70EL1 1684 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MATN4O95460 622 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MNDAP41218 407 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 RAB2AP61019 212 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 IFI44LQ53G44 452 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 BIRC7Q96CA5 298 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 EHD1Q9H4M9 534 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MAN2B2Q9Y2E5 1009 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 G3V2L1 256 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 SLC22A1O15245 554 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 B3GALT2O43825 422 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 PGRP06401 933 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 RYKP34925 604 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 CDH12P55289 794 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 SNAPC1Q16533 368 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 GOLGA7Q7Z5G4 137 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 GJD3Q8N144 294 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 OR10Q1Q8NGQ4 319 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 FBXL20Q96IG2 436 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MAGEE1Q9HCI5 957 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ZCCHC3Q9NUD5 404 aaKnown RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ELOVL2Q9NXB9 296 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 RLN1P04808 185 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 CD247P20963 164 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 AGTRAPQ6RW13 159 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 SLC39A5Q6ZMH5 540 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 FAM98AQ8NCA5 519 aaKnown RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 LRRC20Q8TCA0 184 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 TP53INP1Q96A56 240 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 SLC35G5Q96KT7 338 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MTMR10Q9NXD2 777 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 NKIRAS2Q9NYR9 191 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 FLRT1Q9NZU1 646 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 C2orf78A6NCI8 922 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ZBTB42B2RXF5 422 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 MCIDASD6RGH6 385 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 HTRA2O43464 458 aaPredicted RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 OR1I1O60431 355 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 S1PR4O95977 384 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 HOXB2P14652 356 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 LMAN2Q12907 356 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 TLR1Q15399 786 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ADGRG6Q86SQ4 1221 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ZNF598Q86UK7 904 aaKnown RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 LRRTM3Q86VH5 581 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 TMC8Q8IU68 726 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 C1orf52Q8N6N3 182 aaKnown RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 ZFAND2BQ8WV99 257 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 BTBD1Q9H0C5 482 aa14.61□□□□□ -0.07
NPHP4-201ENST00000378156 CFAP20Q9Y6A4 193 aaKnown RBP14.61□□□□□ -0.07
NPHP4-201ENST00000378156 M0QZQ0 153 aa14.6□□□□□ -0.07
NPHP4-201ENST00000378156 CDKN2DP55273 166 aa14.6□□□□□ -0.07
NPHP4-201ENST00000378156 PDE12Q6L8Q7 609 aaKnown RBP14.6□□□□□ -0.07
NPHP4-201ENST00000378156 TNFAIP8L2Q6P589 184 aaPredicted RBP14.6□□□□□ -0.07
NPHP4-201ENST00000378156 DPY19L3Q6ZPD9 716 aa14.6□□□□□ -0.07
NPHP4-201ENST00000378156 THOC6Q86W42 341 aaKnown RBP14.6□□□□□ -0.07
NPHP4-201ENST00000378156 TMEM145Q8NBT3 493 aa14.6□□□□□ -0.07
NPHP4-201ENST00000378156 OR5K1Q8NHB7 308 aa14.6□□□□□ -0.07
NPHP4-201ENST00000378156 TMLHEQ9NVH6 421 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms