RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 OR8J2Q8NGG1 315 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SH3YL1Q96HL8 342 aaPredicted RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 ZNF641Q96N77 438 aaPredicted RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 NDRG4Q9ULP0 352 aaKnown RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 PLXNA2O75051 1894 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SOBPA7XYQ1 873 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 MAGEB17A8MXT2 336 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 TMEM229AB2RXF0 380 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 LEFTY2O00292 366 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SLC16A5O15375 505 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 CBFA2T3O75081 653 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 GABARAPO95166 117 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 ETHE1O95571 254 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 URODP06132 367 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 NUDT7P0C024 238 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 AP1S2P56377 157 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SRSF11Q05519 484 aaKnown RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 KEAP1Q14145 624 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 NPTX1Q15818 432 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 ADPRMQ3LIE5 342 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 ZNF648Q5T619 568 aaPredicted RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 Q6ZVU0 165 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 HSD11B1LQ7Z5J1 315 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 MRPS31Q92665 395 aaKnown RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 HSH2DQ96JZ2 352 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 SPATA6Q9NWH7 488 aaPredicted RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 PDP1Q9P0J1 537 aaPredicted RBP10.58□□□□□ -0.72
BEST1-201ENST00000378043 VPS29Q9UBQ0 182 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 CCL26Q9Y258 94 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 ERGIC3Q9Y282 383 aa10.58□□□□□ -0.72
BEST1-201ENST00000378043 A0A1W2PRU2 124 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ARHGEF33A8MVX0 844 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 E7EQ34 232 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 EPN2O95208 641 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 POP4O95707 220 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 FABP3P05413 133 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CYP2A7P20853 494 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 FPR1P21462 350 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 DNAJA1P31689 397 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 ATN1P54259 1190 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 IL1RL1Q01638 556 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 IRF8Q02556 426 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 KCNC4Q03721 635 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 NOGQ13253 232 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ATP1A4Q13733 1029 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ACOX1Q15067 660 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CCSMST1Q4G0I0 132 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CBLL1Q75N03 491 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 PARP8Q8N3A8 854 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ELMO1Q92556 727 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ZNF689Q96CS4 500 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 OR4K3Q96R72 315 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 SLC46A2Q9BY10 475 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ALOXE3Q9BYJ1 711 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CHST8Q9H2A9 424 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 FAM8A1Q9UBU6 413 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 HELZP42694 1942 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 FUOMA2VDF0 154 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 OR2AG2A6NM03 316 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 E9PQ18 207 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 PRMT3O60678 531 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 JRKO75564 520 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 SLCO2B1O94956 709 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CPSF4O95639 269 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 OCM2P0CE71 109 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 OCMP0CE72 109 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 COX7A2P14406 83 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 RAB15P59190 212 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CXCR4P61073 352 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 RAE1P78406 368 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 ABRQ12979 859 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CSTF3Q12996 717 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 DDX39BQ13838 428 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 DOC2AQ14183 400 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 XKR6Q5GH73 641 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 LIPJQ5W064 366 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 FAM43BQ6ZT52 329 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 Q6ZVL8 140 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 EIF3MQ7L2H7 374 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 TMEM25Q86YD3 366 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 SYNPOQ8N3V7 929 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 LILRA3Q8N6C8 439 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 TTC29Q8NA56 475 aaPredicted RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 SETD9Q8NE22 299 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 SH3KBP1Q96B97 665 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 YIPF6Q96EC8 236 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 C7orf34Q96L11 122 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ZNF347Q96SE7 839 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 TPT1P8Q9HAU6 139 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 PCDH12Q9NPG4 1184 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 CREBZFQ9NS37 354 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 FAM120CQ9NX05 1096 aaKnown RBP10.57□□□□□ -0.72
BEST1-201ENST00000378043 VPS4AQ9UN37 437 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 DOLKQ9UPQ8 538 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 ERVW-1Q9UQF0 538 aa10.57□□□□□ -0.72
BEST1-201ENST00000378043 B3GNT3Q9Y2A9 372 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms