RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 A0A0X1KG70 313 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CDK14O94921 469 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CR2P20023 1033 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GSK3BP49841 420 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DCDC1P59894 354 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 VMACQ2NL98 169 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NCCRP1Q6ZVX7 275 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 C11orf84Q9BUA3 381 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 BTBD2Q9BX70 525 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 FAM117AQ9C073 453 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 EBF3Q9H4W6 596 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MVB12BQ9H7P6 319 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DAB2P98082 770 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PPARDQ03181 441 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MICAQ29983 383 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 RAD9AQ99638 391 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 BRD9Q9H8M2 597 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TOR4AQ9NXH8 423 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 LAMP2P13473 410 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 L3MBTL4Q8NA19 623 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 BBS10Q8TAM1 723 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TOX2Q96NM4 488 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MFRPQ9BY79 579 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DNAJC15Q9Y5T4 150 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NPIPA7E9PJI5 369 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 G3V2L1 256 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NPIPA8P0DM63 369 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CCT3P49368 545 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 LDLRAD1Q5T700 205 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ANKRD49Q8WVL7 239 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 A0A1W2PRG6 482 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 FMO6PO60774 539 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 IL7RP16871 459 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 COL28A1Q2UY09 1125 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SPOUT1Q5T280 376 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 AGAP7PQ5VUJ5 663 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KCTD18Q6PI47 426 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SYVN1Q86TM6 617 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 C6orf62Q9GZU0 229 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PGAP2Q9UHJ9 254 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CHP2O43745 196 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ATG12O94817 140 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 STSP08842 583 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NFATC2Q13469 925 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ANGPTL8Q6UXH0 198 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MAU2Q9Y6X3 613 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GPX2P18283 190 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ECI1P42126 302 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ACBD7Q8N6N7 88 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SEPHS2Q99611 448 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 H0YIV9 168 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TEX28O15482 410 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 NUDT21O43809 227 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GLIS3Q8NEA6 775 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MGLLQ99685 303 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 H7C2Y5 167 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KHDRBS3O75525 346 aaKnown RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TAF5Q15542 800 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 UBTD2Q8WUN7 234 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 EXOC2Q96KP1 924 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 AIFM2Q9BRQ8 373 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PPLO60437 1756 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ARPC2O15144 300 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CCNYL3P0C7X3 344 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 AWAT2Q6E213 333 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 GAB3Q8WWW8 586 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ART5Q96L15 291 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 FBP2O00757 339 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 DNM1P34Q6PK57 102 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SYTL1Q8IYJ3 562 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CPXM2Q8N436 756 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 RNF217Q8TC41 542 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PHOX2BQ99453 314 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 C17orf62Q9BQA9 187 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SEC22CQ9BRL7 303 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 TPT1P8Q9HAU6 139 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ANKMY1Q9P2S6 941 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CDK2AP1O14519 115 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PPP3CBP16298 524 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CBX5P45973 191 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 RFWD3Q6PCD5 774 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CYP4X1Q8N118 509 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 RAI2Q9Y5P3 530 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 H3BN98 237 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 FHP07954 510 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 PNMTP11086 282 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 IL1R2P27930 398 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 AHRP35869 848 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CDH8P55286 799 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 ZMYND11Q15326 602 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KLHL36Q8N4N3 616 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 VANGL1Q8TAA9 524 aaPredicted RBP4.8□□□□□ -1.64
PCDH9-201ENST00000377861 KCNIP3Q9Y2W7 256 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 SYT5O00445 386 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 P2RX6O15547 441 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 UPK1BO75841 260 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 MARCKSL1P49006 195 aa4.8□□□□□ -1.64
PCDH9-201ENST00000377861 CLCN3P51790 818 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms