RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DUOXA1Q1HG43 343 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 DEPDC1Q5TB30 811 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 LETMD1Q6P1Q0 360 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 CLEC14AQ86T13 490 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TICAM1Q8IUC6 712 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 MYEOVQ96EZ4 313 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 TEFMQ96QE5 360 aaKnown RBP14.07□□□□□ -0.16
TCOF1-202ENST00000377797 FZD3Q9NPG1 666 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 SNX7Q9UNH6 387 aa14.07□□□□□ -0.16
TCOF1-202ENST00000377797 RFXAPO00287 272 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 BCL10O95999 233 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 APOA1P02647 267 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 FGF4P08620 206 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ITGB7P26010 798 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PRDX3P30048 256 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 CEACAM7Q14002 265 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PCBP2Q15366 365 aaKnown RBP eCLIP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ANKRD26P1Q6NSI1 321 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 DEPDC4Q8N2C3 294 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 RHBDF1Q96CC6 855 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 OR2M4Q96R27 311 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PKP2Q99959 881 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 SLC35A5Q9BS91 424 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 GSDMCQ9BYG8 508 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 IFT80Q9P2H3 777 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TESMINQ9Y4I5 508 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PRSS21Q9Y6M0 314 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TRPC1P48995 793 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 KANK2Q63ZY3 851 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 FBXO27Q8NI29 283 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 SMAD5Q99717 465 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TPT1P8Q9HAU6 139 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 FAM120CQ9NX05 1096 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 EI24O14681 340 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 RSL1D1O76021 490 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 JUPP14923 745 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TTKP33981 857 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PON2Q15165 354 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 KRTCAP2Q8N6L1 136 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TRPV3Q8NET8 790 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 AURKBQ96GD4 344 aaPredicted RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 OAZ3Q9UMX2 235 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 TCRBV21S2A2A0A5A6 115 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 LILRB3O75022 631 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PPP1R8Q12972 351 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 MINDY4Q4G0A6 757 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 BHLHA9Q7RTU4 235 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ARMC8Q8IUR7 673 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 OR4K1Q8NGD4 311 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 MPP4Q96JB8 637 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 ADI1Q9BV57 179 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 MRPS26Q9BYN8 205 aaKnown RBP14.06□□□□□ -0.16
TCOF1-202ENST00000377797 SLC17A9Q9BYT1 436 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 CLEC4EQ9ULY5 219 aa14.06□□□□□ -0.16
TCOF1-202ENST00000377797 PDLIM1O00151 329 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CLDN4O14493 209 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 MYL12AP19105 171 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CCR7P32248 378 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 ABHD18Q0P651 414 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 GRIK2Q13002 908 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 DPPA4Q7L190 304 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 SLC35G5Q96KT7 338 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 RASSF1Q9NS23 344 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 DNAJB9Q9UBS3 223 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 MCM8Q9UJA3 840 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 B3GALT2O43825 422 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 UGT2B17O75795 530 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 RPS17P08708 135 aaKnown RBP14.05□□□□□ -0.16
TCOF1-202ENST00000377797 TAS2R41P59536 307 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 ZNF763Q0D2J5 394 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 BLOC1S3Q6QNY0 202 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CHCHD4Q8N4Q1 142 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 LYVE1Q9Y5Y7 322 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 PSMD11O00231 422 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 NPPAP01160 153 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 MMP2P08253 660 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CSNK2A2P19784 350 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-202ENST00000377797 ARNTP27540 789 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 NCBP2P52298 156 aaKnown RBP eCLIP14.05□□□□□ -0.161e-8■■□□□ 13.6
TCOF1-202ENST00000377797 CDH12P55289 794 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 IFI44LQ53G44 452 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 RFLNAQ6ZTI6 216 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 DGKBQ9Y6T7 804 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 SMIM31A0A1B0GVY4 71 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 ADAMDEC1O15204 470 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 GJA4P35212 333 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CTSCP53634 463 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CTSL3PQ5NE16 218 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 TANGO2Q6ICL3 276 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 NPAS3Q8IXF0 933 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 DEFB119Q8N690 84 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 SHDQ96IW2 340 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 WDR92Q96MX6 357 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 CYP8B1Q9UNU6 501 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
TCOF1-202ENST00000377797 DFNA5O60443 496 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms