RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 CASP2P42575 452 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 FOXA1P55317 472 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 IRF8Q02556 426 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 ILKQ13418 452 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 TBCCQ15814 346 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 CLPPQ16740 277 aaPredicted RBP20.46■□□□□ 0.87
CBWD3-202ENST00000377342 GGTA1PQ4G0N0 100 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 ATG16L1Q676U5 607 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 TMEM71Q6P5X7 295 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 PRSS42Q7Z5A4 293 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 PAQR7Q86WK9 346 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 L3MBTL4Q8NA19 623 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 OR4D9Q8NGE8 314 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 TRAPPC9Q96Q05 1148 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 KCNA7Q96RP8 456 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 GFM1Q96RP9 751 aaKnown RBP20.46■□□□□ 0.87
CBWD3-202ENST00000377342 SYNPO2LQ9H987 977 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 C1GALT1Q9NS00 363 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 GEMIN8Q9NWZ8 242 aaKnown RBP20.46■□□□□ 0.87
CBWD3-202ENST00000377342 SEMA5BQ9P283 1151 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 PDP2Q9P2J9 529 aa20.46■□□□□ 0.87
CBWD3-202ENST00000377342 IGHV5-51A0A0C4DH38 117 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SLC30A4O14863 429 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 UGDHO60701 494 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ESRRBO95718 433 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 HSPA4LO95757 839 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 EBLN1P0CF75 366 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 C1GALT1C1LP0DN25 315 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 THRAP10827 490 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 PKNOX1P55347 436 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 REEP5Q00765 189 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SLBPQ14493 270 aaKnown RBP eCLIP20.45■□□□□ 0.86
CBWD3-202ENST00000377342 GRHL2Q6ISB3 625 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SLITRK4Q8IW52 837 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ZNF740Q8NDX6 193 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ATP6V1E2Q96A05 226 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 GRAMD1AQ96CP6 724 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 PTCD3Q96EY7 689 aaKnown RBP20.45■□□□□ 0.86
CBWD3-202ENST00000377342 PLCD4Q9BRC7 762 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 THAP1Q9NVV9 213 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 HAO1Q9UJM8 370 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 STK38LQ9Y2H1 464 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 PCDHGA1Q9Y5H4 931 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 IGHV5-10-1A0A0J9YXX1 117 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SLC9B1P1A6NJY1 282 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 TMEM233B4DJY2 109 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 HAT1O14929 419 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 DKK1O94907 266 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 CLDN9O95484 217 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ARL1P40616 181 aaPredicted RBP20.45■□□□□ 0.86
CBWD3-202ENST00000377342 CCR8P51685 355 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SPIDRQ14159 915 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 CCDC157Q569K6 752 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 FIGLAQ6QHK4 219 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ZNF781Q8N8C0 355 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 C19orf47Q8N9M1 422 aaKnown RBP20.45■□□□□ 0.86
CBWD3-202ENST00000377342 TMEM184CQ9NVA4 438 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 ANKMY1Q9P2S6 941 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 TRPS1Q9UHF7 1281 aa20.45■□□□□ 0.86
CBWD3-202ENST00000377342 SPAARA0A1B0GVQ0 90 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 CTSVO60911 334 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 JUPP14923 745 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 KIF26BQ2KJY2 2108 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 SNAP47Q5SQN1 464 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 CACHD1Q5VU97 1274 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 LIPJQ5W064 366 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 ADNP2Q6IQ32 1131 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 ADCK2Q7Z695 626 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 MILR1Q7Z6M3 343 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 B3GNT8Q7Z7M8 397 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 SLCO6A1Q86UG4 719 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 MYLK4Q86YV6 388 aaPredicted RBP20.44■□□□□ 0.86
CBWD3-202ENST00000377342 PLD3Q8IV08 490 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 CARFQ8N187 725 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 AGR3Q8TD06 166 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 DPYSL5Q9BPU6 564 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 EFCAB11Q9BUY7 163 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 ZDHHC2Q9UIJ5 367 aa20.44■□□□□ 0.86
CBWD3-202ENST00000377342 TCP11X1B4DZS4 312 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 RASSF9O75901 435 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 HRH2P25021 359 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 INSM1Q01101 510 aaPredicted RBP20.43■□□□□ 0.86
CBWD3-202ENST00000377342 TCHHL1Q5QJ38 904 aaPredicted RBP20.43■□□□□ 0.86
CBWD3-202ENST00000377342 CLEC6AQ6EIG7 209 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 CDYL2Q8N8U2 506 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 WDR48Q8TAF3 677 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 ZUFSPQ96AP4 578 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 CCDC74BQ96LY2 380 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 EML4Q9HC35 981 aaKnown RBP20.43■□□□□ 0.86
CBWD3-202ENST00000377342 FAM60AQ9NP50 221 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 PILRAQ9UKJ1 303 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 SNX7Q9UNH6 387 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 RAP2CQ9Y3L5 183 aa20.43■□□□□ 0.86
CBWD3-202ENST00000377342 FEZF1A0PJY2 475 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 GIPC1O14908 333 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 HCRTR1O43613 425 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 CAPN1P07384 714 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 ANKRD34CP0C6C1 535 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 HNF4AP41235 474 aa20.42■□□□□ 0.86
CBWD3-202ENST00000377342 CLDN6P56747 220 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms