RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 PRAP1Q96NZ9 151 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 DPH2Q9BQC3 489 aaPredicted RBP13.9□□□□□ -0.18
UBE4B-203ENST00000377153 EFHD1Q9BUP0 239 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 CAPS2Q9BXY5 557 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 GPN2Q9H9Y4 310 aaPredicted RBP13.9□□□□□ -0.18
UBE4B-203ENST00000377153 DNAJC11Q9NVH1 559 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 CPSF2Q9P2I0 782 aaKnown RBP13.9□□□□□ -0.18
UBE4B-203ENST00000377153 XPR1Q9UBH6 696 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 SLC22A14Q9Y267 594 aa13.9□□□□□ -0.18
UBE4B-203ENST00000377153 IGKV1-8A0A0C4DH67 115 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 SRRM3A6NNA2 597 aaPredicted RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 HAT1O14929 419 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 ZNF749O43361 778 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 CCNT2O60583 730 aaKnown RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 SMIM24O75264 130 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 EIF2S1P05198 315 aaKnown RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 NPPBP16860 134 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 ZNF28P17035 718 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 AGXTP21549 392 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 SLC6A12P48065 614 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 GABRA4P48169 554 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 HSPA7P48741 367 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TMPRSS3P57727 454 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 YBX1P67809 324 aaKnown RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 ABHD18Q0P651 414 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 CDC16Q13042 620 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 RASA2Q15283 850 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TGIF1Q15583 401 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TECRLQ5HYJ1 363 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 YOD1Q5VVQ6 348 aaPredicted RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 NKD1Q969G9 470 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 NEIL2Q969S2 332 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 RNF31Q96EP0 1072 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 LRFN5Q96NI6 719 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 CCNL2Q96S94 520 aaPredicted RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 C17orf62Q9BQA9 187 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TMEM79Q9BSE2 394 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 MRPL46Q9H2W6 279 aaKnown RBP13.89□□□□□ -0.19
UBE4B-203ENST00000377153 PELI2Q9HAT8 420 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 GPRC5BQ9NZH0 403 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 OPTCQ9UBM4 332 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 PADI1Q9ULC6 663 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 ANGPTL3Q9Y5C1 460 aa13.89□□□□□ -0.19
UBE4B-203ENST00000377153 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 C9J4A7 227 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 TAF4O00268 1085 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 CLGNO14967 610 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 NRP2O60462 931 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 RFPL1O75677 317 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 GGT5P36269 586 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 STAT5AP42229 794 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 PIK3CGP48736 1102 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
UBE4B-203ENST00000377153 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 FRMPD2BQ6IN97 320 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 CCDC81Q6ZN84 652 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 KLHDC8AQ8IYD2 350 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 CSNK1A1LQ8N752 337 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 ZSCAN1Q8NBB4 408 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 ABHD11Q8NFV4 315 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 OR2W6PQ8NHA6 318 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 PROKR1Q8TCW9 393 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 UBTD2Q8WUN7 234 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 MR1Q95460 341 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 THAP11Q96EK4 314 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 OR4K3Q96R72 315 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 MRPL57Q9BQC6 102 aaKnown RBP13.88□□□□□ -0.19
UBE4B-203ENST00000377153 AIF1LQ9BQI0 150 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 CD244Q9BZW8 370 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 PRM3Q9NNZ6 103 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 KCND3Q9UK17 655 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 PTBP2Q9UKA9 531 aaKnown RBP13.88□□□□□ -0.19
UBE4B-203ENST00000377153 SH2B3Q9UQQ2 575 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 TNPO3Q9Y5L0 923 aaKnown RBP13.88□□□□□ -0.19
UBE4B-203ENST00000377153 FREM2Q5SZK8 3169 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 AHCTF1Q8WYP5 2266 aa13.88□□□□□ -0.19
UBE4B-203ENST00000377153 URB1O60287 2271 aaKnown RBP13.87□□□□□ -0.19
UBE4B-203ENST00000377153 TEX51A0A1B0GUA7 166 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 A0A1B0GX78 115 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 CCDC151A5D8V7 595 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 H0YGG7 62 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 GOLGA8RI6L899 631 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 MEN1O00255 615 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 HCRTR1O43613 425 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 GLRA3O75311 464 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 GSTA1P08263 222 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 SLC35G6P0C7Q6 338 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 PYGBP11216 843 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 TAC1P20366 129 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 CXCR2P25025 360 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 DLSTP36957 453 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 GDF5P43026 501 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 ARF3P61204 181 aaPredicted RBP13.87□□□□□ -0.19
UBE4B-203ENST00000377153 CSNK1G2P78368 415 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 TLE3Q04726 772 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 SETDB1Q15047 1291 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 PFKFB4Q16877 469 aa13.87□□□□□ -0.19
UBE4B-203ENST00000377153 ZXDCQ2QGD7 858 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms