RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 ATP6V1B2P21281 511 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 RAE1P78406 368 aaKnown RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MAD2L1Q13257 205 aaPredicted RBP12.14□□□□□ -0.47
CLCN6-206ENST00000376496 NFATC4Q14934 902 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 Q6ZSR6 202 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MINDY1Q8N5J2 469 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 BIRC7Q96CA5 298 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 OR52E6Q96RD3 313 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 TIMM29Q9BSF4 260 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 INPP5KQ9BT40 448 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 IKZF5Q9H5V7 419 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 CLMPQ9H6B4 373 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 GPRC5BQ9NZH0 403 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 VAPAQ9P0L0 249 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 PCDHGA11Q9Y5H2 935 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 PCDHA9Q9Y5H5 950 aa12.14□□□□□ -0.47
CLCN6-206ENST00000376496 MYO15AQ9UKN7 3530 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 PI15O43692 258 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 SAMD4BQ5PRF9 694 aaKnown RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 OR4F3Q6IEY1 312 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 RNF165Q6ZSG1 346 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 TRIM69Q86WT6 500 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 KBTBD2Q8IY47 623 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 OR52E1Q8NGJ3 308 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 WDR48Q8TAF3 677 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 PATE1Q8WXA2 126 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 WDR92Q96MX6 357 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 POLMQ9NP87 494 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 NMRK1Q9NWW6 199 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 USP36Q9P275 1121 aaKnown RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 STOML1Q9UBI4 398 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 BTBD3Q9Y2F9 522 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 NEUROG3Q9Y4Z2 214 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 HEATR5BQ9P2D3 2071 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 RPSAP08865 295 aaKnown RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 HOXB3P14651 431 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 GLULP15104 373 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ACTR1BP42025 376 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 GSK3BP49841 420 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ACTR1AP61163 376 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 LIPEQ05469 1076 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 DMPKQ09013 629 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 RPE65Q16518 533 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 HKDC1Q2TB90 917 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ATG9BQ674R7 924 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 VN1R5Q7Z5H4 357 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ADCK2Q7Z695 626 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 TBC1D21Q8IYX1 336 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ZNF687Q8N1G0 1237 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 CHCHD4Q8N4Q1 142 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 ASB9Q96DX5 294 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 HOPXQ9BPY8 73 aaPredicted RBP12.13□□□□□ -0.47
CLCN6-206ENST00000376496 MACROD1Q9BQ69 325 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 AK5Q9Y6K8 562 aa12.13□□□□□ -0.47
CLCN6-206ENST00000376496 FAM170BA6NMN3 283 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 GPR89AB7ZAQ6 455 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 CELA2BP08218 269 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 GPR89BP0CG08 455 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 CDKN2CP42773 168 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 CLDN8P56748 225 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 CSTF3Q12996 717 aaKnown RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 FZD5Q13467 585 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 MAPKAPK3Q16644 382 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ALG11Q2TAA5 492 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 UAP1L1Q3KQV9 507 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ARMCX6Q7L4S7 300 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SPPL2CQ8IUH8 684 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 PHACTR4Q8IZ21 702 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 GTF2H4Q92759 462 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SPHK1Q9NYA1 384 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ABCD2Q9UBJ2 740 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SUCOQ9UBS9 1254 aaKnown RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 FBXL21Q9UKT6 434 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 DUSP12Q9UNI6 340 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 V9GYQ6 96 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 PRR19A6NJB7 356 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ZNF839A8K0R7 811 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 RTCAO00442 366 aaKnown RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 FKBP6O75344 327 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 CCR3P51677 355 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 FAM180BQ6P0A1 224 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 C17orf64Q86WR6 236 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 SIX5Q8N196 739 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 TSPEARQ8WU66 669 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 RSRC1Q96IZ7 334 aaKnown RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 COPS7BQ9H9Q2 264 aaPredicted RBP12.12□□□□□ -0.47
CLCN6-206ENST00000376496 DMRT3Q9NQL9 472 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 KLF15Q9UIH9 416 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
CLCN6-206ENST00000376496 ABCA7Q8IZY2 2146 aa12.11□□□□□ -0.47
CLCN6-206ENST00000376496 FANCMQ8IYD8 2048 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms