RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 PRAP1Q96NZ9 151 aa22.05■■□□□ 1.12
HLA-C-202ENST00000376237 EPN3Q9H201 632 aa22.05■■□□□ 1.12
HLA-C-202ENST00000376237 CUEDC1Q9NWM3 386 aaPredicted RBP22.05■■□□□ 1.12
HLA-C-202ENST00000376237 VTI1BQ9UEU0 232 aa22.05■■□□□ 1.12
HLA-C-202ENST00000376237 PCDHGA11Q9Y5H2 935 aa22.05■■□□□ 1.12
HLA-C-202ENST00000376237 IGKV1-8A0A0C4DH67 115 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 H0YIV9 168 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 HMOX2P30519 316 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 GRIA3P42263 894 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 LIMK1P53667 647 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 YBX1P67809 324 aaKnown RBP22.04■■□□□ 1.12
HLA-C-202ENST00000376237 CSNK1G2P78368 415 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 RELAQ04206 551 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 NKAIN2Q5VXU1 208 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 KANK2Q63ZY3 851 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 ZNF425Q6IV72 752 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 TBC1D19Q8N5T2 526 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 REPS1Q96D71 796 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 SEMA6CQ9H3T2 930 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 LRRN3Q9H3W5 708 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 NT5DC2Q9H857 520 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 TNFRSF12AQ9NP84 129 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 SLC6A20Q9NP91 592 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 PFDN4Q9NQP4 134 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 PNPOQ9NVS9 261 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 SNX6Q9UNH7 406 aa22.04■■□□□ 1.12
HLA-C-202ENST00000376237 KCNE1BA0A087WTH5 132 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 TLCD2A6NGC4 264 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 GDF9O60383 454 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 CPNE6O95741 557 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 KRT6AP02538 564 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 C9P02748 559 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 KRT6BP04259 564 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 CD22P20273 847 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 CDH3P22223 829 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 VARSP26640 1264 aaKnown RBP22.03■■□□□ 1.12
HLA-C-202ENST00000376237 KRT6CP48668 564 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 ZNF33BQ06732 778 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 SLBPQ14493 270 aaKnown RBP eCLIP22.03■■□□□ 1.12
HLA-C-202ENST00000376237 CPSF6Q16630 551 aaKnown RBP eCLIP22.03■■□□□ 1.12
HLA-C-202ENST00000376237 MED27Q6P2C8 311 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 ADCK2Q7Z695 626 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 WDR48Q8TAF3 677 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 CCT7Q99832 543 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 PLCD4Q9BRC7 762 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 SIKE1Q9BRV8 207 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 TRIM55Q9BYV6 548 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 ZMYND15Q9H091 742 aa22.03■■□□□ 1.12
HLA-C-202ENST00000376237 GEMIN8Q9NWZ8 242 aaKnown RBP22.03■■□□□ 1.12
HLA-C-202ENST00000376237 GOLGA4Q13439 2230 aaKnown RBP22.02■■□□□ 1.12
HLA-C-202ENST00000376237 HDAC3O15379 428 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 TROVE2P10155 538 aaKnown RBP eCLIP22.02■■□□□ 1.12
HLA-C-202ENST00000376237 KITP10721 976 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 MAGP20916 626 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 FOXA1P55317 472 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 ZRSR2Q15696 482 aaKnown RBP22.02■■□□□ 1.12
HLA-C-202ENST00000376237 CLEC6AQ6EIG7 209 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 FIGLAQ6QHK4 219 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 TMIGD1Q6UXZ0 262 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 USP53Q70EK8 1073 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 CPLX4Q7Z7G2 160 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 FAM20CQ8IXL6 584 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 TGM7Q96PF1 710 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 KCNA7Q96RP8 456 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 PHOX2BQ99453 314 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 SARGQ9BW04 601 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 MARCOQ9UEW3 520 aaPredicted RBP22.02■■□□□ 1.12
HLA-C-202ENST00000376237 TSC22D4Q9Y3Q8 395 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 TIMM22Q9Y584 194 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 DNAJC15Q9Y5T4 150 aa22.02■■□□□ 1.12
HLA-C-202ENST00000376237 MN1Q10571 1320 aaPredicted RBP22.02■■□□□ 1.12
HLA-C-202ENST00000376237 OR2A25A4D2G3 310 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 ULK1O75385 1050 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 RPLP0P05388 317 aaKnown RBP22.01■■□□□ 1.11
HLA-C-202ENST00000376237 PPP1CAP62136 330 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 CCL7P80098 99 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 REEP5Q00765 189 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 ILKQ13418 452 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 UGT3A2Q3SY77 523 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 FRG2Q64ET8 278 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 TMEM71Q6P5X7 295 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 RNF165Q6ZSG1 346 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 TRIM73Q86UV7 250 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 LAS2Q8IYD9 372 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 FRG2BQ96QU4 278 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 MAP3K3Q99759 626 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 ELOVL6Q9H5J4 265 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 FIS1Q9Y3D6 152 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 FRYLO94915 3013 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 TRBC2A0A5B9 178 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 TMEM233B4DJY2 109 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 TOX3O15405 576 aaPredicted RBP22.01■■□□□ 1.11
HLA-C-202ENST00000376237 EZRP15311 586 aaKnown RBP22.01■■□□□ 1.11
HLA-C-202ENST00000376237 GSTM2P28161 218 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 LSSP48449 732 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 CFHR1Q03591 330 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 IFT88Q13099 833 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 FAM92BQ6ZTR7 304 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 PIP4P1Q86T03 277 aa22.01■■□□□ 1.11
HLA-C-202ENST00000376237 PAQR7Q86WK9 346 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms