RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 C15orf52Q6ZUT6 534 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 FCAMRQ8WWV6 532 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 LRRN3Q9H3W5 708 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 SYN3O14994 580 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 RNASEH2AO75792 299 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 ANXA3P12429 323 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 BMP8BP34820 402 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 EEF1DP3Q658K8 133 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 BMP8AQ7Z5Y6 402 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 RIMS1Q86UR5 1692 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 C13orf42A0A1B0GVH6 325 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 SLC6A9P48067 706 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 CDH15P55291 814 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 TMEM220Q6QAJ8 160 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 TMCO2Q7Z6W1 182 aaPredicted RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 ZNF565Q8N9K5 539 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 ADAD1Q96M93 576 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 BARD1Q99728 777 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 TM9SF3Q9HD45 589 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 ZDHHC18Q9NUE0 388 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 SALL4Q9UJQ4 1053 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 H0YAE9 185 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 PLA2G16P53816 162 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 SLC8B1Q6J4K2 584 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 CEP97Q8IW35 865 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 SLC22A18Q96BI1 424 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 ZNF317Q96PQ6 595 aaPredicted RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 CYP2S1Q96SQ9 504 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.59□□□□□ -0.87
SPEN-201ENST00000375759 DTLQ9NZJ0 730 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 ZNF726A6NNF4 738 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 J3QRK9 145 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 CSTBP04080 98 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 CBSLP0DN79 551 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 CBSP35520 551 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 NRIP1P48552 1158 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 BTBD16Q32M84 506 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 TBRG1Q3YBR2 411 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 ZNF598Q86UK7 904 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 TMEM145Q8NBT3 493 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 NDRG1Q92597 394 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 FBXL8Q96CD0 374 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 HNRNPABQ99729 332 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 RPF2Q9H7B2 306 aaKnown RBP9.59□□□□□ -0.87
SPEN-201ENST00000375759 CCSER2Q9H7U1 834 aa9.59□□□□□ -0.87
SPEN-201ENST00000375759 WASHC1A8K0Z3 465 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 WASH3PC4AMC7 463 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CLCN2P51788 898 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 GSCP56915 257 aaPredicted RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 WDR4P57081 412 aaKnown RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 WASH2PQ6VEQ5 465 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CHST9Q7L1S5 443 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SSX6Q7RTT6 188 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 IL31RAQ8NI17 732 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SMIM28A0A1B0GU29 152 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 FAM189A1O60320 539 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CREB1P16220 341 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 HTR2AP28223 471 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 HSDL1Q3SXM5 330 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 TOR1AIP1Q5JTV8 583 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SPIN3Q5JUX0 258 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 EPYCQ99645 322 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 UCK2Q9BZX2 261 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CST3P01034 146 aaPredicted RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 MT-ND5P03915 603 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 VEGFAP15692 232 aaPredicted RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 FIP1L1Q6UN15 594 aaKnown RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 PFDN5Q99471 154 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 NLGN3Q9NZ94 848 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 MMP3P08254 477 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 FPR1P21462 350 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 AMZ2Q86W34 360 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 JAGN1Q8N5M9 183 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CD300LFQ8TDQ1 290 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 PSMG2Q969U7 264 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 NIFKQ9BYG3 293 aaKnown RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 ACTR6Q9GZN1 396 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SMURF1Q9HCE7 757 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 ARL5AQ9Y689 179 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 LOC100509620A0A075B734 347 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 CAPN15O75808 1086 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 HOXD8P13378 290 aaPredicted RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 CHRNB2P17787 502 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 EFNA1P20827 205 aaPredicted RBP9.58□□□□□ -0.88
SPEN-201ENST00000375759 CHAF1BQ13112 559 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 PON3Q15166 354 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 UBXN11Q5T124 520 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 PKP4Q99569 1192 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 M0R129 80 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 VNN2O95498 520 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 IFNA2P01563 188 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 RPS3P23396 243 aaKnown RBP eCLIP9.58□□□□□ -0.88
SPEN-201ENST00000375759 CD40LGP29965 261 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 FRG2Q64ET8 278 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SLC36A4Q6YBV0 504 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 GPR142Q7Z601 462 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 SNX29P2Q8IUI4 249 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 PYROXD2Q8N2H3 581 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 ZNF709Q8N972 641 aa9.58□□□□□ -0.88
SPEN-201ENST00000375759 ZCCHC10Q8TBK6 192 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms