RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 C14orf105Q9NVL8 296 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 ASF1AQ9Y294 204 aa11.5□□□□□ -0.57
HDAC8-204ENST00000373560 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 KLHL33A6NCF5 533 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 SYT5O00445 386 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 CNOT4O95628 575 aaKnown RBP11.49□□□□□ -0.57
HDAC8-204ENST00000373560 EIF2S1P05198 315 aaKnown RBP11.49□□□□□ -0.57
HDAC8-204ENST00000373560 PRSS56P0CW18 603 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 C8orf89P0DMQ9 161 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 ICAM2P13598 275 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 PSMB5P28074 263 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 ACADLP28330 430 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 TPP2P29144 1249 aaPredicted RBP11.49□□□□□ -0.57
HDAC8-204ENST00000373560 DPYSL3Q14195 570 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 CAPRIN1Q14444 709 aaKnown RBP11.49□□□□□ -0.57
HDAC8-204ENST00000373560 BRD3Q15059 726 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 FAM214AQ32MH5 1076 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 FILIP1LQ4L180 1135 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 SIRPB2Q5JXA9 342 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 CCDC122Q5T0U0 273 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 ARHGAP11AQ6P4F7 1023 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 GLT6D1Q7Z4J2 308 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 CPEB2Q7Z5Q1 589 aaKnown RBP11.49□□□□□ -0.57
HDAC8-204ENST00000373560 KIF2BQ8N4N8 673 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 PQLC3Q8N755 202 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 BTBD6Q96KE9 485 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 VN1R1Q9GZP7 353 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 CDCP1Q9H5V8 836 aa11.49□□□□□ -0.57
HDAC8-204ENST00000373560 RAI1Q7Z5J4 1906 aaPredicted RBP11.48□□□□□ -0.57
HDAC8-204ENST00000373560 A0A087X1B8 175 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
HDAC8-204ENST00000373560 SUN1O94901 812 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 IFNA2P01563 188 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 EPXP11678 715 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 BMP7P18075 431 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 CDKN1CP49918 316 aaPredicted RBP11.48□□□□□ -0.57
HDAC8-204ENST00000373560 ITGA8P53708 1063 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 AP2B1P63010 937 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 DMTNQ08495 405 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 KRT81Q14533 505 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 PRTGQ2VWP7 1150 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 ZC3H12BQ5HYM0 836 aaKnown RBP11.48□□□□□ -0.57
HDAC8-204ENST00000373560 CCDC183Q5T5S1 534 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 PRSS57Q6UWY2 283 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 NAXEQ8NCW5 288 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 C16orf52Q8NHV5 167 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 FAM71BQ8TC56 605 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 ZFYVE21Q9BQ24 234 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 CNPPD1Q9BV87 410 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 SLC25A51Q9H1U9 297 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 ASB8Q9H765 288 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 HOOK1Q9UJC3 728 aaKnown RBP11.48□□□□□ -0.57
HDAC8-204ENST00000373560 ARL5AQ9Y689 179 aa11.48□□□□□ -0.57
HDAC8-204ENST00000373560 A0A0U1RQJ8 604 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 KRT87PA6NCN2 255 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 CCL22O00626 93 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 CLDN4O14493 209 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 FOXS1O43638 330 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 SRP72O76094 671 aaKnown RBP11.47□□□□□ -0.57
HDAC8-204ENST00000373560 SLC26A3P40879 764 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 NR1H2P55055 460 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 WNT3P56703 355 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 XIAPP98170 497 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 PPIDQ08752 370 aaKnown RBP11.47□□□□□ -0.57
HDAC8-204ENST00000373560 BOLA3Q53S33 107 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 SEM1Q6ZVN7 128 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 ANKRD37Q7Z713 158 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 HIPK1Q86Z02 1210 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 TBC1D21Q8IYX1 336 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 OR5K2Q8NHB8 316 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 RNASE6Q93091 150 aaKnown RBP11.47□□□□□ -0.57
HDAC8-204ENST00000373560 MMABQ96EY8 250 aaPredicted RBP11.47□□□□□ -0.57
HDAC8-204ENST00000373560 CABS1Q96KC9 395 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 SARGQ9BW04 601 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 PLA2G12AQ9BZM1 189 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 TGIF2Q9GZN2 237 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 HAUS2Q9NVX0 235 aa11.47□□□□□ -0.57
HDAC8-204ENST00000373560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.47□□□□□ -0.57
HDAC8-204ENST00000373560 A0A0A6YYC8 382 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 A0A0G2JMM0 328 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 A0A1W2PPB8 328 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 A0A1W2PRS3 328 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 FAM166BA8MTA8 275 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 ARHGEF33A8MVX0 844 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 KIR3DP1A8MWS1 328 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 I3L1I5 382 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 SPRY1O43609 319 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 PEX1O43933 1283 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 ATP1B2P14415 290 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 MX2P20592 715 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 GJC1P36383 396 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 GRB7Q14451 532 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 MUM1Q2TAK8 710 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 HKDC1Q2TB90 917 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms