RNA–Protein interactions for RNA: ENST00000370952.3

LRRC40-201, Transcript of leucine rich repeat containing 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC40, Length 2,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40-201ENST00000370952 RFXANKO14593 260 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TAPBPO15533 448 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 RAMP2O60895 175 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 NBNO60934 754 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 AOC2O75106 756 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 UGT2B17O75795 530 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TBX18O95935 607 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SMIM10L2AP0DMW4 78 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SMIM10L2BP0DMW5 78 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 RPS12P25398 132 aaKnown RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 KDELR2P33947 212 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 HTR7P34969 479 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TIE1P35590 1138 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 RPS19P39019 145 aaKnown RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 RGRP47804 291 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 LIMK1P53667 647 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 PCBP2Q15366 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 CPSF6Q16630 551 aaKnown RBP eCLIP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SLC39A12Q504Y0 691 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 LRIF1Q5T3J3 769 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MBOAT1Q6ZNC8 495 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 ZSWIM9Q86XI8 627 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SPERTQ8NA61 448 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MYEOVQ96EZ4 313 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 BARHL1Q9BZE3 327 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 PRDM5Q9NQX1 630 aaPredicted RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF226Q9NYT6 803 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 STMN3Q9NZ72 180 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 CFL2Q9Y281 166 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 V9GYH0 126 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MOXD2PA6NHM9 499 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 WASH4PA8MWX3 477 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 AKR7A2O43488 359 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 GLUD1P00367 558 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 C9P02748 559 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 OR4Q2P0C623 313 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SMPD1P17405 629 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 GGT2P36268 569 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 PBX3P40426 434 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 ZXDBP98169 803 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MXD1Q05195 221 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MAD2L1Q13257 205 aaPredicted RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 EFR3AQ14156 821 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 VMACQ2NL98 169 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 FBXL22Q6P050 247 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TMPRSS11AQ6ZMR5 421 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 CCDC28AQ8IWP9 274 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 FAM20CQ8IXL6 584 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 PAF1Q8N7H5 531 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 OR6J1Q8NGC5 347 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 PEX13Q92968 403 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TBC1D20Q96BZ9 403 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 ULK4Q96C45 1275 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 RIPOR3Q96MK2 946 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MGLLQ99685 303 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 DYRK4Q9NR20 520 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 SNTG1Q9NSN8 517 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 TMEM248Q9NWD8 314 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 MAT2BQ9NZL9 334 aa9.37□□□□□ -0.91
LRRC40-201ENST00000370952 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
LRRC40-201ENST00000370952 LTBP3Q9NS15 1303 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 SMLR1H3BR10 107 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 TREHO43280 583 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ESR1P03372 595 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 NUDT7P0C024 238 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CCNYL3P0C7X3 344 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 POU2F1P14859 743 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ITGA1P56199 1179 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 C19orf57Q0VDD7 668 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 EFEMP1Q12805 493 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 HYAL2Q12891 473 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 GLCCI1Q86VQ1 547 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 MIB1Q86YT6 1006 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ZZZ3Q8IYH5 903 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF683Q8IZ20 524 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CACTIN-AS1Q8N1I8 211 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 FAM109AQ8N4B1 249 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 SLC5A8Q8N695 610 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 LPCAT1Q8NF37 534 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ANKK1Q8NFD2 765 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 B3GNT7Q8NFL0 401 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 RPRD1AQ96P16 312 aaPredicted RBP9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CCM2Q9BSQ5 444 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ASPNQ9BXN1 380 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF408Q9H9D4 720 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 MS4A12Q9NXJ0 267 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 WWOXQ9NZC7 414 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 SPEF1Q9Y4P9 236 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 TNPO3Q9Y5L0 923 aaKnown RBP9.36□□□□□ -0.91
LRRC40-201ENST00000370952 GREB1Q4ZG55 1949 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CCDC182A6NF36 153 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CLIC1O00299 241 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 SLC28A1O00337 649 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 ZNF780AO75290 641 aaPredicted RBP9.36□□□□□ -0.91
LRRC40-201ENST00000370952 KCNK5O95279 499 aa9.36□□□□□ -0.91
LRRC40-201ENST00000370952 CPSF4O95639 269 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms