RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 TRAV19A0A0A6YYK7 116 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 E9PQ18 207 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 J3QRK9 145 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 KPNA4O00629 521 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 GRM6O15303 877 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 GSTM1P09488 218 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 TFPTP0C1Z6 253 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 GABRR2P28476 465 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 GRK3P35626 688 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 CTSOP43234 321 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 MAPK9P45984 424 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 SERPINB10P48595 397 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 CLK3P49761 638 aaKnown RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 STK19P49842 368 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 MLLT10P55197 1068 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 CREMQ03060 361 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 ANXA8L1Q5VT79 327 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 KIAA1614Q5VZ46 1190 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 FAHD1Q6P587 224 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.84□□□□□ -0.19
CD48-201ENST00000368045 CAMKMTQ7Z624 323 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 GALNT5Q7Z7M9 940 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 DDX53Q86TM3 631 aaKnown RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 IGFN1Q86VF2 1251 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 VRK3Q8IV63 474 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 TTC29Q8NA56 475 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 MINDY2Q8NBR6 621 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 OR7A2PQ8NGA2 310 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 WDR20Q8TBZ3 569 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 CLP1Q92989 425 aaKnown RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 YIPF6Q96EC8 236 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 SH3YL1Q96HL8 342 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 EPYCQ99645 322 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 FAM83CQ9BQN1 747 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 REEP1Q9H902 201 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 BRF2Q9HAW0 419 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 ERVK-18Q9QC07 812 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 NFKBIL1Q9UBC1 381 aaPredicted RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 B4GALT6Q9UBX8 382 aa13.84□□□□□ -0.19
CD48-201ENST00000368045 TDRKHQ9Y2W6 561 aaKnown RBP13.84□□□□□ -0.19
CD48-201ENST00000368045 MYO1GB0I1T2 1018 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 WASH3PC4AMC7 463 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 H0YIV9 168 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 XPNPEP2O43895 674 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 SLCO2B1O94956 709 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 B3GALT4O96024 378 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 ABCB1P08183 1280 aaPredicted RBP13.83□□□□□ -0.19
CD48-201ENST00000368045 CYP2A6P11509 494 aaPredicted RBP13.83□□□□□ -0.19
CD48-201ENST00000368045 ITPKAP23677 461 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 OPRL1P41146 370 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 CYP4F8P98187 520 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 ACSM2AQ08AH3 577 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 MAD2L1BPQ15013 274 aaPredicted RBP13.83□□□□□ -0.19
CD48-201ENST00000368045 ACSM2BQ68CK6 577 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 GRHL2Q6ISB3 625 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 BRAT1Q6PJG6 821 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 ZNF621Q6ZSS3 439 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 RFLNAQ6ZTI6 216 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 GAREM2Q75VX8 874 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 SYNPOQ8N3V7 929 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 VPS37AQ8NEZ2 397 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 PYCR2Q96C36 320 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 HSH2DQ96JZ2 352 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 ZDHHC6Q9H6R6 413 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 AKIP1Q9NQ31 210 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 KRT84Q9NSB2 600 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 EXD2Q9NVH0 621 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 GIN1Q9NXP7 522 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 SPG21Q9NZD8 308 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 PDP1Q9P0J1 537 aaPredicted RBP13.83□□□□□ -0.19
CD48-201ENST00000368045 KIF17Q9P2E2 1029 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 SAMHD1Q9Y3Z3 626 aaKnown RBP13.83□□□□□ -0.19
CD48-201ENST00000368045 CORINQ9Y5Q5 1042 aa13.83□□□□□ -0.19
CD48-201ENST00000368045 FUOMA2VDF0 154 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 SCAMP2O15127 329 aaKnown RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 RGS10O43665 173 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 XYLBO75191 536 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 C9P02748 559 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 LAG3P18627 525 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 ST13P50502 369 aaKnown RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 BCAP31P51572 246 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 PNLIPRP1P54315 467 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 VLDLRP98155 873 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 DGUOKQ16854 277 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 PROX2Q3B8N5 592 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 SLC44A4Q53GD3 710 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 DPY19L3Q6ZPD9 716 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 PRSS48Q7RTY5 328 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 P2RY8Q86VZ1 359 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 THOC6Q86W42 341 aaKnown RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 TMCO5AQ8N6Q1 288 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 ZNF557Q8N988 423 aaPredicted RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 ELMO1Q92556 727 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 ITFG2Q969R8 447 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 C11orf24Q96F05 449 aaPredicted RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 BARD1Q99728 777 aaKnown RBP13.83□□□□□ -0.2
CD48-201ENST00000368045 EBPLQ9BY08 206 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 EPS8L2Q9H6S3 715 aa13.83□□□□□ -0.2
CD48-201ENST00000368045 ANKHQ9HCJ1 492 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms