RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 OR5M3Q8NGP4 307 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.8□□□□□ -0.2
VAMP4-202ENST00000367740 MMABQ96EY8 250 aaPredicted RBP13.8□□□□□ -0.2
VAMP4-202ENST00000367740 SLC6A16Q9GZN6 736 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 VN1R1Q9GZP7 353 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 SYNPO2LQ9H987 977 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 AIPL1Q9NZN9 384 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 PRSS21Q9Y6M0 314 aa13.8□□□□□ -0.2
VAMP4-202ENST00000367740 LRRD1A4D1F6 860 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 H7C1Q1 480 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 PRMT3O60678 531 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 PROSCO94903 275 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 AP2A2O94973 939 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 FKBP9O95302 570 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 SKILP12757 684 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 NR0B1P51843 470 aaKnown RBP13.79□□□□□ -0.2
VAMP4-202ENST00000367740 DCAF7P61962 342 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 MAT1AQ00266 395 aaKnown RBP13.79□□□□□ -0.2
VAMP4-202ENST00000367740 FLYWCH1Q4VC44 716 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 SYTL3Q4VX76 610 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 ARHGAP11AQ6P4F7 1023 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 ZNF567Q8N184 647 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 POGLUT1Q8NBL1 392 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 SIMC1Q8NDZ2 872 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 METTL21AQ8WXB1 218 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 MMP25Q9NPA2 562 aa13.79□□□□□ -0.2
VAMP4-202ENST00000367740 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
VAMP4-202ENST00000367740 RUVBL1Q9Y265 456 aaKnown RBP13.79□□□□□ -0.2
VAMP4-202ENST00000367740 A0A0G2JNJ9 132 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 RNF212BA8MTL3 300 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 FOXS1O43638 330 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 ANXA5P08758 320 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 ZFP36L2P47974 494 aaKnown RBP13.78□□□□□ -0.2
VAMP4-202ENST00000367740 DYNLT1P63172 113 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 MSLNQ13421 630 aaPredicted RBP13.78□□□□□ -0.2
VAMP4-202ENST00000367740 PCBP2Q15366 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAMP4-202ENST00000367740 DBN1Q16643 649 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 HKDC1Q2TB90 917 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 DNAJC21Q5F1R6 531 aaKnown RBP13.78□□□□□ -0.2
VAMP4-202ENST00000367740 PIANPQ8IYJ0 282 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 SHISA5Q8N114 240 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 ARHGEF39Q8N4T4 335 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 SLC5A8Q8N695 610 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 OR10Q1Q8NGQ4 319 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 M1APQ8TC57 530 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 CYTH2Q99418 400 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 MIPEPQ99797 713 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 ZFYVE21Q9BQ24 234 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 GORASP1Q9BQQ3 440 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 PLEKHF2Q9H8W4 249 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 Q9UFV3 132 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
VAMP4-202ENST00000367740 A0A0A6YYC8 382 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 OR2A25A4D2G3 310 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 H0YGG7 62 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 I3L1I5 382 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 PDE9AO76083 593 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 FTH1P02794 183 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 CD53P19397 219 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 ARF3P61204 181 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 UBE2HP62256 183 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 EXT1Q16394 746 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 SLC25A35Q3KQZ1 300 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 ARHGAP21Q5T5U3 1957 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 VSIG1Q86XK7 387 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 DCUN1D3Q8IWE4 304 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 LGI4Q8N135 537 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 OR2L3Q8NG85 312 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 C16orf52Q8NHV5 167 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 C19orf43Q9BQ61 176 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 APOL2Q9BQE5 337 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 TTYH2Q9BSA4 534 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 PNPLA3Q9NST1 481 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 BEX4Q9NWD9 120 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 SMARCAL1Q9NZC9 954 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 SAE1Q9UBE0 346 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 C19orf25Q9UFG5 118 aaPredicted RBP13.77□□□□□ -0.21
VAMP4-202ENST00000367740 FAM215AQ9Y5M1 114 aa13.77□□□□□ -0.21
VAMP4-202ENST00000367740 LRRC10BA6NIK2 292 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 CRTAMO95727 393 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 CYC1P08574 325 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 GLI4P10075 376 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 ZFXP17010 805 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TPP2P29144 1249 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 ADRA1AP35348 466 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 ARHGAP25P42331 645 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 CSE1LP55060 971 aaKnown RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 SNRPNP63162 240 aaKnown RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 PLOD1Q02809 727 aaPredicted RBP13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TYRO3Q06418 890 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 Q5PR19 223 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 FBXO42Q6P3S6 717 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 RANBP10Q6VN20 620 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 TAS2R42Q7RTR8 314 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 PID1Q7Z2X4 250 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 VRK3Q8IV63 474 aa13.76□□□□□ -0.21
VAMP4-202ENST00000367740 SLC22A15Q8IZD6 547 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms