RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FOXS1O43638 330 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 NME2P1O60361 137 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 HEXBP07686 556 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 CCDC172P0C7W6 258 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 PECAM1P16284 738 aaPredicted RBP8□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF24P17028 368 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 NME2P22392 152 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 CXCR2P25025 360 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 ACRV1P26436 265 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLC26A3P40879 764 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 MAT1AQ00266 395 aaKnown RBP8□□□□□ -1.13
HMGB1P39-201ENST00000366304 TYRO3Q06418 890 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 FAM214AQ32MH5 1076 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 CMPK2Q5EBM0 449 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 PLAG1Q6DJT9 500 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLC25A25Q6KCM7 469 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 PRMT9Q6P2P2 845 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 FBXO42Q6P3S6 717 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 PHC2Q8IXK0 858 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF567Q8N184 647 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 ACRBPQ8NEB7 543 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 DENND1AQ8TEH3 1009 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 RND1Q92730 232 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 TRIM11Q96F44 468 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 COX4I2Q96KJ9 171 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 UCN2Q96RP3 112 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 UTP23Q9BRU9 249 aaKnown RBP8□□□□□ -1.13
HMGB1P39-201ENST00000366304 TUBB6Q9BUF5 446 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 VN1R1Q9GZP7 353 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 DMRT3Q9NQL9 472 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 AIPL1Q9NZN9 384 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 POLG2Q9UHN1 485 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 HIVEP2P31629 2446 aa8□□□□□ -1.13
HMGB1P39-201ENST00000366304 CUBNO60494 3623 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 GABRR3A8MPY1 467 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 TMEM229AB2RXF0 380 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 MYO1FO00160 1098 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 PDE9AO76083 593 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 PROSCO94903 275 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 EIF2S1P05198 315 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 MYBL2P10244 700 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 RALBP11234 206 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CD9P21926 228 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ADRA1AP35348 466 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ADH7P40394 386 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CSE1LP55060 971 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 DYNLT1P63172 113 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 PDK1Q15118 436 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 TAZQ16635 292 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 MAPKAPK3Q16644 382 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 HADHQ16836 314 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 HKDC1Q2TB90 917 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 BTBD16Q32M84 506 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CCSMST1Q4G0I0 132 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZC3H12BQ5HYM0 836 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 RTL6Q6ICC9 239 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 DENND5AQ6IQ26 1287 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ARSKQ6UWY0 536 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 RNF44Q7L0R7 432 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 SNX20Q7Z614 316 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CAMKMTQ7Z624 323 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 GTPBP3Q969Y2 492 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ULK4Q96C45 1275 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF354BQ96LW1 612 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ZNF830Q96NB3 372 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 FCRL5Q96RD9 977 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 OLFM1Q99784 485 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 YIPF2Q9BWQ6 316 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 TGIF2Q9GZN2 237 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 C10orf88Q9H8K7 445 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 LUC7LQ9NQ29 371 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 MKL2Q9ULH7 1088 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 CBLCQ9ULV8 474 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 MYO6Q9UM54 1294 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 RUVBL1Q9Y265 456 aaKnown RBP7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 KLK4Q9Y5K2 254 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 FAM215AQ9Y5M1 114 aa7.99□□□□□ -1.13
HMGB1P39-201ENST00000366304 ANK2Q01484 3957 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A0A6YYC8 382 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A0G2JNJ9 132 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A1W2PPR1 153 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A0A1W2PPV9 198 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 LRRD1A4D1F6 860 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 A6NNC1 897 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 H0YGG7 62 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 H7C1Q1 480 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 I3L1I5 382 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 APOL1O14791 398 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 RASGRF2O14827 1237 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 LIN7AO14910 233 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 P2RX6O15547 441 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 HS6ST1O60243 411 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 SRPX2O60687 465 aaPredicted RBP7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 SLC25A12O75746 678 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 MLYCDO95822 493 aa7.98□□□□□ -1.13
HMGB1P39-201ENST00000366304 RAF1P04049 648 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms