RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 NLE1Q9NVX2 485 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 RGS17Q9UGC6 210 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 PDCD5O14737 125 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 MATN1P21941 496 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 OXTRP30559 389 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 AP1S1P61966 158 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 GRIK2Q13002 908 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 TBC1D25Q3MII6 688 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 CRB2Q5IJ48 1285 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 PRSS48Q7RTY5 328 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 FAM120CQ9NX05 1096 aaKnown RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 UPB1Q9UBR1 384 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 DAPL1A0PJW8 107 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 NRP1O14786 923 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 RGS8P57771 180 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 LARS2Q15031 903 aaKnown RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 DESI1Q6ICB0 168 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 KIAA1161Q6NSJ0 714 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 SPARTQ8N0X7 666 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 ADAMTS15Q8TE58 950 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 FERD3LQ96RJ6 166 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 HAPLN2Q9GZV7 340 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 ZNF214Q9UL59 606 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 PLCL2Q9UPR0 1127 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 MAB21L2Q9Y586 359 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 FKBP7Q9Y680 259 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 PDPK1O15530 556 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 MATN4O95460 622 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 KHKP50053 298 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 GALNT1Q10472 559 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 LRP8Q14114 963 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 CBX2Q14781 532 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 ZNF598Q86UK7 904 aaKnown RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 PKP4Q99569 1192 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 MYOCQ99972 504 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 GPN2Q9H9Y4 310 aaPredicted RBP13.58□□□□□ -0.24
SMC5-201ENST00000361138 DNAJC15Q9Y5T4 150 aa13.58□□□□□ -0.24
SMC5-201ENST00000361138 IQCMA0A1B0GVH7 501 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 A0A1W2PRB8 838 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ARVCFO00192 962 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 TREHO43280 583 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 SRPRAP08240 638 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 ARFIP1P53367 373 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SGCGQ13326 291 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 FRG2Q64ET8 278 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 TNFAIP8L2Q6P589 184 aaPredicted RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 SHQ1Q6PI26 577 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 LSM14AQ8ND56 463 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 CREB3L1Q96BA8 519 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SLC35G5Q96KT7 338 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 FRG2BQ96QU4 278 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CYP2S1Q96SQ9 504 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ZSCAN5AQ9BUG6 496 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CD244Q9BZW8 370 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 RANBP3Q9H6Z4 567 aaPredicted RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 NUP50Q9UKX7 468 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 A0A1B0GVM2 712 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 OR2B3O76000 313 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 RPL10P27635 214 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 MAGEA6P43360 314 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 PLA2G4EQ3MJ16 856 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 POMGNT2Q8NAT1 580 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CHPT1Q8WUD6 406 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SLC35C2Q9NQQ7 365 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 DNAJC27Q9NZQ0 273 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ZCWPW2A0A1B0GU75 182 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 INMT-MINDY4F8WBC2 141 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 HAS3O00219 553 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CRYZL1O95825 349 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SMSP52788 366 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 WNT7BP56706 349 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 PPP3R1P63098 170 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 DUSP4Q13115 394 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SPIN4Q56A73 249 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 CXCL17Q6UXB2 119 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 C2orf73Q8N5S3 287 aaPredicted RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ATAD1Q8NBU5 361 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 MRGPRX2Q96LB1 330 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SLC30A3Q99726 388 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 TPT1P8Q9HAU6 139 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 STARD7Q9NQZ5 370 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SMIM30A4D0T7 59 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 C7orf72A4D263 438 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 NUDT14O95848 222 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 LCN1P31025 176 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 RGS1Q08116 209 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 TARBP2Q15633 366 aaKnown RBP13.57□□□□□ -0.24
SMC5-201ENST00000361138 MTMR14Q8NCE2 650 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 OR5AK3PQ8NH89 298 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 SOCS4Q8WXH5 440 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 TNKS2Q9H2K2 1166 aa13.57□□□□□ -0.24
SMC5-201ENST00000361138 PCDHGB6Q9Y5F9 930 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms