RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 NT5C3BQ969T7 300 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 CNPPD1Q9BV87 410 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 NUP205Q92621 2012 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SMCHD1A6NHR9 2005 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 TRBC2A0A5B9 178 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SAGP10523 405 aaPredicted RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 ACRV1P26436 265 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 DSTNP60981 165 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 BIKQ13323 160 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 C6orf141Q5SZD1 244 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 CNKSR3Q6P9H4 555 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 ZNF783Q6ZMS7 281 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 CNTN4Q8IWV2 1026 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 YIPF4Q9BSR8 244 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 POLR2J2Q9GZM3 115 aaKnown RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 KCNH6Q9H252 994 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 DCSTAMPQ9H295 470 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 DNAAF2Q9NVR5 837 aaKnown RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 RBMX2Q9Y388 322 aaKnown RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 H0YJX3 145 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 FOXD2O60548 495 aaPredicted RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 CCNKO75909 580 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 ARCN1P48444 511 aaKnown RBP15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LSAMPQ13449 338 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 MYBPC3Q14896 1274 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LETMD1Q6P1Q0 360 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PLET1Q6UQ28 207 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LARP4Q71RC2 724 aaKnown RBP eCLIP15.87■□□□□ 0.133e-6■■■□□ 18.2
SCAF1-201ENST00000360565 TICAM1Q8IUC6 712 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 APCDD1Q8J025 514 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 OXR1Q8N573 874 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 PHC3Q8NDX5 983 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LCN9Q8WX39 176 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 MYRFLQ96LU7 910 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 LMAN2LQ9H0V9 348 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 RNF186Q9NXI6 227 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 SPATA7Q9P0W8 599 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 ERVW-1Q9UQF0 538 aa15.87■□□□□ 0.13
SCAF1-201ENST00000360565 MATN4O95460 622 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 BMP2P12643 396 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ACP5P13686 325 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CD247P20963 164 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 PRR5P85299 388 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 OR52E8Q6IFG1 317 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TMPRSS11AQ6ZMR5 421 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CYP4V2Q6ZWL3 525 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-201ENST00000360565 NFKBIDQ8NI38 313 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 PRICKLE1Q96MT3 831 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-201ENST00000360565 SOHLH2Q9NX45 425 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 PEX16Q9Y5Y5 336 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 COL4A1P02462 1669 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 H0YAE9 185 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TEAD2Q15562 447 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ATG9BQ674R7 924 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ZNF544Q6NX49 715 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 VITQ6UXI7 678 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TMIGD1Q6UXZ0 262 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CLEC14AQ86T13 490 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CPA6Q8N4T0 437 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TFGQ92734 400 aaPredicted RBP15.86■□□□□ 0.13
SCAF1-201ENST00000360565 RETREG1Q9H6L5 497 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TAC3Q9UHF0 121 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ABHD14A-ACY1A0A1B0GW23 586 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 MMP20O60882 483 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 RPL10P27635 214 aaKnown RBP15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CDKL1Q00532 357 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 COQ5Q5HYK3 327 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 NCEH1Q6PIU2 408 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 MAVSQ7Z434 540 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TSPAN33Q86UF1 283 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 ARRDC2Q8TBH0 407 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 KCNS3Q9BQ31 491 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 SLITRK2Q9H156 845 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 TM9SF3Q9HD45 589 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 IL17CQ9P0M4 197 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 CDC14AQ9UNH5 594 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 PRKAB1Q9Y478 270 aa15.86■□□□□ 0.13
SCAF1-201ENST00000360565 SLC30A4O14863 429 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 AXIN1O15169 862 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 ETV3P41162 512 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 CLCNKAP51800 687 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 INHBCP55103 352 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 MEF2AQ02078 507 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-201ENST00000360565 TMEM115Q12893 351 aaPredicted RBP15.85■□□□□ 0.13
SCAF1-201ENST00000360565 CYBRD1Q53TN4 286 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 C11orf88Q6PI97 169 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 FAM129CQ86XR2 697 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 WDR48Q8TAF3 677 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 CD200R1Q8TD46 325 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 WFIKKN2Q8TEU8 576 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 GEMIN6Q8WXD5 167 aaKnown RBP15.85■□□□□ 0.13
SCAF1-201ENST00000360565 PCBD2Q9H0N5 130 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 CNOT11Q9UKZ1 510 aaKnown RBP15.85■□□□□ 0.13
SCAF1-201ENST00000360565 DLGAP4Q9Y2H0 992 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 GPR39O43194 453 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 BPIP17213 487 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 GPX3P22352 226 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 PRMT2P55345 433 aa15.85■□□□□ 0.13
SCAF1-201ENST00000360565 LARS2Q15031 903 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms