RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PGM2L1Q6PCE3 622 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 MTERF1Q99551 399 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 RABL2AQ9UBK7 228 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 RABL2BQ9UNT1 228 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 SH3D21A4FU49 640 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 EPHB6O15197 1021 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ATP1B2P14415 290 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 PLP2Q04941 152 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ABRAXAS2Q15018 415 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF630Q2M218 657 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 AADACL2Q6P093 401 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ARL9Q6T311 187 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 MON1BQ7L1V2 547 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CENPSQ8N2Z9 138 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 PCDH19Q8TAB3 1148 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 Q9Y3F1 56 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 EDF1O60869 148 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 IRF7Q92985 503 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF350Q9GZX5 532 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CPQQ9Y646 472 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 EDDM13A0A1B0GTR0 161 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 IFNA2P01563 188 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 RPS14P62263 151 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 FOXK1P85037 733 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 RFWD3Q6PCD5 774 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF783Q6ZMS7 281 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ALG3Q92685 438 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 C17orf62Q9BQA9 187 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 A0A075B6Q4 140 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 GLTPD2A6NH11 291 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZER1Q7Z7L7 766 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 OR8H1Q8NGG4 311 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 PELOQ9BRX2 385 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 TRMT61BQ9BVS5 477 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 CD84Q9UIB8 345 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 NT5C1B-RDH14C9J2C7 533 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 MT-CYBP00156 380 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 SMPD1P17405 629 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 S1PR1P21453 382 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 TCEA1P23193 301 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 BMP8BP34820 402 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF550Q7Z398 422 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 BMP8AQ7Z5Y6 402 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 Q9N2J8 555 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 PTTG2Q9NZH5 202 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 AQP12BA6NM10 295 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 M0R036 132 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 MID1O15344 667 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 AQP12AQ8IXF9 295 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ING5Q8WYH8 240 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 PLK2Q9NYY3 685 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ISPDA4D126 451 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 MAT2AP31153 395 aaKnown RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 GFOD2Q3B7J2 385 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 OLFML1Q6UWY5 402 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ZNF782Q6ZMW2 699 aaPredicted RBP9.44□□□□□ -0.9
CUX1-203ENST00000360264 KCNK18Q7Z418 384 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 TMEM156Q8N614 296 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 FANK1Q8TC84 345 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 GRHL3Q8TE85 626 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 ORAI3Q9BRQ5 295 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CYTH4Q9UIA0 394 aa9.44□□□□□ -0.9
CUX1-203ENST00000360264 CASP7P55210 303 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ADGRE1Q14246 886 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 IL31RAQ8NI17 732 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 KCNN1Q92952 543 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 UCK2Q9BZX2 261 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ZCCHC3Q9NUD5 404 aaKnown RBP9.43□□□□□ -0.9
CUX1-203ENST00000360264 NLGN3Q9NZ94 848 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 KCNN3Q9UGI6 736 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 CREBBPQ92793 2442 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ZNF536O15090 1300 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ITGA5P08648 1049 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 GSTT2P0CG29 244 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 SEPHS1P49903 392 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 LILRA4P59901 499 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 GTPBP3Q969Y2 492 aaKnown RBP9.43□□□□□ -0.9
CUX1-203ENST00000360264 OR2AG1Q9H205 316 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 GRHL1Q9NZI5 618 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 SLC17A7Q9P2U7 560 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 CRISP1P54107 249 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 SPERTQ8NA61 448 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 EBPLQ9BY08 206 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ABCB8Q9NUT2 735 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 PRAMEF33A0A0G2JMD5 474 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 PRAMEF10O60809 474 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 DCDC1P59894 354 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 TREML2Q5T2D2 321 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 NIPA2Q8N8Q9 360 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 ADAMTS18Q8TE60 1221 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 HK1P19367 917 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 OR12D2P58182 307 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 EFR3AQ14156 821 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 GRHPRQ9UBQ7 328 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 PMM2O15305 246 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 TAS2R43P59537 309 aa9.43□□□□□ -0.9
CUX1-203ENST00000360264 CSTF1Q05048 431 aaKnown RBP9.43□□□□□ -0.9
CUX1-203ENST00000360264 AP1S3Q96PC3 154 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms