RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 TMEM74Q96NL1 305 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 VPS35Q96QK1 796 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 TRIM54Q9BYV2 358 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 EPB41L1Q9H4G0 881 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 SERHL2Q9H4I8 314 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 SDR39U1Q9NRG7 319 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-202ENST00000359366 EGFL7Q9UHF1 273 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 CD207Q9UJ71 328 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 KCNK6Q9Y257 313 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 DLGAP4Q9Y2H0 992 aa4.93□□□□□ -1.62
ATXN3-202ENST00000359366 PLXND1Q9Y4D7 1925 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TRBV23OR9-2A0A075B6M9 112 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 LOC105371267A0A1B0GV96 52 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SMIM31A0A1B0GVY4 71 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 POM121BA6NF01 834 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 NVLO15381 856 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 AKAP10O43572 662 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PSIP1O75475 530 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TSPAN9O75954 239 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 CLDN9O95484 217 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 C1orf105O95561 183 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 GSTM1P09488 218 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR35P0CG20 571 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 GNAZP19086 355 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 BTF3P20290 206 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PSMB5P28074 263 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 NTSR1P30989 418 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ACSL1P33121 698 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 MTHFRP42898 656 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SLC6A12P48065 614 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 KRT6CP48668 564 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ERVK-8P63133 956 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR20EP86478 221 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR20CP86479 221 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR20DP86480 221 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR20BP86481 221 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PRR20AP86496 221 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ILF2Q12905 390 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 GTF2H3Q13889 308 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 IMPG1Q17R60 797 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF658BQ4V348 819 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TPRG1LQ5T0D9 272 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 RNF220Q5VTB9 566 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 FAM46CQ5VWP2 391 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 LPCAT4Q643R3 524 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF776Q68DI1 518 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ANKRD26P1Q6NSI1 321 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 CYP2U1Q7Z449 544 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 NLRP8Q86W28 1048 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 THOC6Q86W42 341 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ANKRD46Q86W74 232 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 RALGPS2Q86X27 583 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ZSCAN1Q8NBB4 408 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF740Q8NDX6 193 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 BHLHE22Q8NFJ8 381 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 OR7G1Q8NGA0 311 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PROKR1Q8TCW9 393 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 HCAR2Q8TDS4 363 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ZNF480Q8WV37 535 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 HMGB4Q8WW32 186 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SELENOMQ8WWX9 145 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 NEIL2Q969S2 332 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 APIPQ96GX9 242 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 EGLN2Q96KS0 407 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PPM1MQ96MI6 270 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TSSK3Q96PN8 268 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 C19orf43Q9BQ61 176 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SPNS1Q9H2V7 528 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 RDH14Q9HBH5 336 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TRIM39Q9HCM9 518 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 DNAJC11Q9NVH1 559 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 AIG1Q9NVV5 245 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PTTG2Q9NZH5 202 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ASF1AQ9Y294 204 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 CCL27Q9Y4X3 112 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 V9GYQ6 96 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SPTBP11277 2137 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SCN2AQ99250 2005 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SHISA7A6NL88 538 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 OR52A4PA6NMU1 304 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 CENPBD1B2RD01 187 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ANHXE9PGG2 379 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 FXYD1O00168 92 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PSMD11O00231 422 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ANGPT2O15123 496 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 YKT6O15498 198 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SULT1B1O43704 296 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 RNGTTO60942 597 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 GUCY1B2O75343 617 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 SLC22A3O75751 556 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 AP2A2O94973 939 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 ETHE1O95571 254 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 DNTTP04053 509 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 MPC1LP0DKB6 136 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PCNAP12004 261 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 CTRB1P17538 263 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 EIF2DP41214 584 aaKnown RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 TSPAN7P41732 249 aa4.92□□□□□ -1.62
ATXN3-202ENST00000359366 PXNP49023 591 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-202ENST00000359366 POLR2JP52435 117 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms