RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 MAD2L1Q13257 205 aaPredicted RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 DDX39BQ13838 428 aaKnown RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 ELOCQ15369 112 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 ZNF423Q2M1K9 1284 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 IL23RQ5VWK5 629 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 TRIM48Q8IWZ4 208 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 ADGRF3Q8IZF5 1079 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 FAM46DQ8NEK8 389 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 OR4E2Q8NGC2 313 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 UTP4Q969X6 686 aaKnown RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 TEX37Q96LM6 180 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.42■□□□□ 0.22
TPM1-205ENST00000357980 CACNA1EQ15878 2313 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 TMEM131Q92545 1883 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 FOXE1O00358 373 aaPredicted RBP16.41■□□□□ 0.22
TPM1-205ENST00000357980 ANKRD28O15084 1053 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 GYG2O15488 501 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 VIPP01282 170 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 G6PDP11413 515 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 PCNAP12004 261 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 NQO1P15559 274 aaKnown RBP16.41■□□□□ 0.22
TPM1-205ENST00000357980 ZFP36L2P47974 494 aaKnown RBP16.41■□□□□ 0.22
TPM1-205ENST00000357980 CCR8P51685 355 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 NME5P56597 212 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 REEP5Q00765 189 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 MAPRE2Q15555 327 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 HIST2H2ACQ16777 129 aaPredicted RBP16.41■□□□□ 0.22
TPM1-205ENST00000357980 HIST2H2AA3Q6FI13 130 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 CYP20A1Q6UW02 462 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 ZDHHC1Q8WTX9 485 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 UBE2E3Q969T4 207 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 C11orf24Q96F05 449 aaPredicted RBP16.41■□□□□ 0.22
TPM1-205ENST00000357980 SLC45A3Q96JT2 553 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 FCRL1Q96LA6 429 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 SRMSQ9H3Y6 488 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 ACTL8Q9H568 366 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 TMEM45AQ9NWC5 275 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 ZIM2Q9NZV7 527 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 VPS29Q9UBQ0 182 aa16.41■□□□□ 0.22
TPM1-205ENST00000357980 H7BY64 318 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 ETHE1O95571 254 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 ACPPP15309 386 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 AMD1P17707 334 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 PIK3CBP42338 1070 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 HNRNPKP61978 463 aaKnown RBP eCLIP16.4■□□□□ 0.22
TPM1-205ENST00000357980 LYSMD4Q5XG99 296 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 VN1R5Q7Z5H4 357 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 C11orf74Q86VG3 221 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 KRT78Q8N1N4 520 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 ZNF548Q8NEK5 533 aaPredicted RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 OR2L3Q8NG85 312 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 PROKR1Q8TCW9 393 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 APIPQ96GX9 242 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 METTL2AQ96IZ6 378 aaKnown RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 PRAP1Q96NZ9 151 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 AIF1LQ9BQI0 150 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 CADM1Q9BY67 442 aaKnown RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 PITHD1Q9GZP4 211 aaPredicted RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 SLC52A3Q9NQ40 469 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 DMRT3Q9NQL9 472 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 SPASTQ9UBP0 616 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 TMED5Q9Y3A6 229 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 BTN3A3O00478 584 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 GSC2O15499 205 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 SNRPB2P08579 225 aaKnown RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 KRT16P08779 473 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 C21orf59P57076 290 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 UFM1P61960 85 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 CSNK1G2P78368 415 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 ABATP80404 500 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 CUL3Q13618 768 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 RCAN2Q14206 197 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 PLCL1Q15111 1095 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 BLOC1S3Q6QNY0 202 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 GKN2Q86XP6 184 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 FBXL6Q8N531 539 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 DTWD2Q8NBA8 298 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 FLVCR1-AS1Q8TAF5 88 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 LMX1AQ8TE12 382 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 RCN3Q96D15 328 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 SLC25A23Q9BV35 468 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 RHBGQ9H310 441 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 SLC6A20Q9NP91 592 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 PPT2Q9UMR5 302 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 EIF3LQ9Y262 564 aaKnown RBP16.4■□□□□ 0.22
TPM1-205ENST00000357980 DLGAP4Q9Y2H0 992 aa16.4■□□□□ 0.22
TPM1-205ENST00000357980 B4DGG1 531 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 FBP2O00757 339 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 SLC22A3O75751 556 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 BCKDHAP12694 445 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 EZRP15311 586 aaKnown RBP16.39■□□□□ 0.21
TPM1-205ENST00000357980 JAK1P23458 1154 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 CXCR2P25025 360 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 DHPSP49366 369 aaPredicted RBP16.39■□□□□ 0.21
TPM1-205ENST00000357980 RPS13P62277 151 aaKnown RBP16.39■□□□□ 0.21
TPM1-205ENST00000357980 TBL3Q12788 808 aaKnown RBP16.39■□□□□ 0.21
TPM1-205ENST00000357980 PLK5Q496M5 336 aa16.39■□□□□ 0.21
TPM1-205ENST00000357980 FAM20CQ8IXL6 584 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms