RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 MSANTD3Q96H12 275 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZIM3Q96PE6 472 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NODALQ96S42 347 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PDCD2LQ9BRP1 358 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TMED9Q9BVK6 235 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 WWTR1Q9GZV5 400 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 UNC93B1Q9H1C4 597 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 FARSBQ9NSD9 589 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OXSMQ9NWU1 459 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ABCA6Q8N139 1617 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 A0A1B0GVC2 190 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 FAM240BA0A1B0GVZ2 78 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 IRGMA1A4Y4 181 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OR6C75A6NL08 312 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HSBP1L1C9JCN9 74 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 C9JVG2 144 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 POP4O95707 220 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 P2RX1P51575 399 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CCR8P51685 355 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GBX2P52951 348 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RUNDC3AQ59EK9 446 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ADGRD1Q6QNK2 874 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ASB18Q6ZVZ8 466 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ARHGAP12Q8IWW6 846 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 C12orf76Q8N812 135 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OR8H1Q8NGG4 311 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 SNIP1Q8TAD8 396 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ACOT12Q8WYK0 555 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TNFRSF25Q93038 417 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TSACCQ96A04 125 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CPNE2Q96FN4 548 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RNF157Q96PX1 679 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ROPN1BQ9BZX4 212 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ROPN1Q9HAT0 212 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 LRTM1Q9HBL6 345 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CCDC59Q9P031 241 aaKnown RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 BAIAP2Q9UQB8 552 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NPFFR2Q9Y5X5 522 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 CDHR2Q9BYE9 1310 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 H3BQ06 376 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HCRTR2O43614 444 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF780AO75290 641 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 OPN1LWP04000 364 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 FABP3P05413 133 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RARAP10276 462 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 BMP1P13497 986 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 JUNDP17535 347 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TACR2P21452 398 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GSTM2P28161 218 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 FOLR3P41439 243 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 LUMP51884 338 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 EPHA5P54756 1037 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RAB8AP61006 207 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ABRAXAS2Q15018 415 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RHEBQ15382 184 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NKPD1Q17RQ9 610 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF776Q68DI1 518 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 VSTM1Q6UX27 236 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 USP49Q70CQ1 688 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 C10orf107Q8IVU9 208 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 NAT9Q9BTE0 207 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TWSG1Q9GZX9 223 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 EHD4Q9H223 541 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 ZBTB20Q9HC78 741 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PLSCR3Q9NRY6 295 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 GRHL1Q9NZI5 618 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TAC3Q9UHF0 121 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 RAPGEFL1Q9UHV5 662 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 LAMP5Q9UJQ1 280 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 PADI3Q9ULW8 664 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 TMX2Q9Y320 296 aa5.66□□□□□ -1.5
BRCA1-203ENST00000357654 HACD1B0YJ81 288 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 LGALS8O00214 317 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 PLK4O00444 970 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 PITPNM1O00562 1244 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 DVL1O14640 695 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 CYB5BO43169 146 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 TREHO43280 583 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 AP1G1O43747 822 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 PEX10O60683 326 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 UGT2B11O75310 529 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 AHSA1O95433 338 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 THEGLP0DJG4 465 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 PEPDP12955 493 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 HK1P19367 917 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 MAGEA6P43360 314 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 DVL1P1P54792 670 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-203ENST00000357654 GALNT1Q10472 559 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-203ENST00000357654 LDLRAP1Q5SW96 308 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 LRIG3Q6UXM1 1119 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 AMIGO2Q86SJ2 522 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 SLC44A3Q8N4M1 653 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 KBTBD8Q8NFY9 601 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 STK32AQ8WU08 396 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF606Q8WXB4 792 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 CASKIN2Q8WXE0 1202 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 TRIB2Q92519 343 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 BADQ92934 168 aa5.65□□□□□ -1.5
BRCA1-203ENST00000357654 IL22Q9GZX6 179 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms