RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TBC1D29Q9UFV1 150 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 CIDEBQ9UHD4 219 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 PLLPQ9Y342 182 aa8.87□□□□□ -0.99
UPF2-202ENST00000357604 A0A1W2PR77 199 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 FCHO1O14526 889 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 LBPP18428 481 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 FBXW4P57775 412 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 DCDP81605 110 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 NFKB2Q00653 900 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 ZKSCAN8Q15776 578 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 IER5LQ5T953 404 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ZNF771Q7L3S4 317 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 PRSS42Q7Z5A4 293 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 AGR3Q8TD06 166 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 MMABQ96EY8 250 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 RBM18Q96H35 190 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 HCN2Q9UL51 889 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 A0A0G2JND7 137 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 BCAS2O75934 225 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 RNH1P13489 461 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 ICAM2P13598 275 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ACP1P24666 158 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CDKN1CP49918 316 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 CDKN2DP55273 166 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CPSF6Q16630 551 aaKnown RBP eCLIP8.86□□□□□ -0.991e-6■■□□□ 14.4
UPF2-202ENST00000357604 ZNF761Q86XN6 746 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 HORMAD2Q8N7B1 307 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 DLGAP2Q9P1A6 1054 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 RUVBL1Q9Y265 456 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 WBP11Q9Y2W2 641 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 PATE3B3GLJ2 98 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 FAM155BO75949 473 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 KRT75O95678 551 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 SFTPCP11686 197 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 AHRP35869 848 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CSTF3Q12996 717 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 PWP1Q13610 501 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 GAS6Q14393 721 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 PTCHD3Q3KNS1 767 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 TCEAL6Q6IPX3 200 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 PRMT9Q6P2P2 845 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ZNF534Q76KX8 674 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 SPRED1Q7Z699 444 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 TCEAL3Q969E4 200 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 PPCDCQ96CD2 204 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 TRPC4Q9UBN4 977 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 PDE10AQ9Y233 779 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 SLC22A14Q9Y267 594 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 HELZP42694 1942 aaKnown RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 KCNK5O95279 499 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 IFNA14P01570 189 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ZNF460Q14592 562 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 RFLNAQ6ZTI6 216 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CUZD1Q86UP6 607 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CDYL2Q8N8U2 506 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 CLEC1AQ8NC01 280 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 UBTD2Q8WUN7 234 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ASB11Q8WXH4 323 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ACTL8Q9H568 366 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 EXO5Q9H790 373 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 KRCC1Q9NPI7 259 aaPredicted RBP8.86□□□□□ -0.99
UPF2-202ENST00000357604 CUTCQ9NTM9 273 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 FGFR1OP2Q9NVK5 253 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 COPG2Q9UBF2 871 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 ATP6V1HQ9UI12 483 aa8.86□□□□□ -0.99
UPF2-202ENST00000357604 PLD2O14939 933 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 ERI3O43414 337 aaKnown RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 PRPS2P11908 318 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 ATP5A1P25705 553 aaKnown RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 PLA2G5P39877 138 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 NCALDP61601 193 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TRABD2AQ86V40 505 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PIANPQ8IYJ0 282 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 NLGN4XQ8N0W4 816 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 FRMD1Q8N878 549 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 NLGN4YQ8NFZ3 816 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 NELL1Q92832 810 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 C5orf34Q96MH7 638 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 LRTM1Q9HBL6 345 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 MKKSQ9NPJ1 570 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 VPS4AQ9UN37 437 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TICRRQ7Z2Z1 1910 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 TMEM8BA6NDV4 472 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 ZNF891A8MT65 544 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 STMND1H3BQB6 276 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 CDC7O00311 574 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 FFAR3O14843 346 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 GPR42O15529 346 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 SKAP2O75563 359 aaPredicted RBP8.85□□□□□ -0.99
UPF2-202ENST00000357604 PRIM2P49643 509 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 VPS26BQ4G0F5 336 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 GUSBP11Q6P575 273 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 MCUR1Q96AQ8 359 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 OR52A5Q9H2C5 316 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 PRTFDC1Q9NRG1 225 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 RPS6KB2Q9UBS0 482 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 CDC14CA4D256 554 aa8.85□□□□□ -0.99
UPF2-202ENST00000357604 D6RAR5 112 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms