RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 SLC1A6P48664 564 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 SEPHS1P49903 392 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 NOVA1P51513 510 aaKnown RBP24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ABCE1P61221 599 aaKnown RBP24.38■■□□□ 1.49
SSBP3-202ENST00000357475 SIM1P81133 766 aaPredicted RBP24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ATG9BQ674R7 924 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ALYREFQ86V81 257 aaKnown RBP24.38■■□□□ 1.49
SSBP3-202ENST00000357475 FAM129CQ86XR2 697 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 OR4K1Q8NGD4 311 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 KCNA7Q96RP8 456 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ZNF382Q96SR6 550 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 CD180Q99467 661 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 SORT1Q99523 831 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 PLCD4Q9BRC7 762 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 ACTR8Q9H981 624 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 MID1IP1Q9NPA3 183 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 GEMIN8Q9NWZ8 242 aaKnown RBP24.38■■□□□ 1.49
SSBP3-202ENST00000357475 PDP2Q9P2J9 529 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 PCDHGA1Q9Y5H4 931 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 DCHS1Q96JQ0 3298 aa24.38■■□□□ 1.49
SSBP3-202ENST00000357475 KCNE1BA0A087WTH5 132 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 HCRTR1O43613 425 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 CTSVO60911 334 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 H2AFYO75367 372 aaKnown RBP24.37■■□□□ 1.49
SSBP3-202ENST00000357475 MDH1P40925 334 aaKnown RBP24.37■■□□□ 1.49
SSBP3-202ENST00000357475 FOXA1P55317 472 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 SLBPQ14493 270 aaKnown RBP eCLIP24.37■■□□□ 1.49
SSBP3-202ENST00000357475 ADNP2Q6IQ32 1131 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 MYLK4Q86YV6 388 aaPredicted RBP24.37■■□□□ 1.49
SSBP3-202ENST00000357475 AGR3Q8TD06 166 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 WDR34Q96EX3 536 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 NTMT1Q9BV86 223 aa24.37■■□□□ 1.49
SSBP3-202ENST00000357475 CNOT1A5YKK6 2376 aaKnown RBP24.37■■□□□ 1.49
SSBP3-202ENST00000357475 OR2A25A4D2G3 310 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 SNNO75324 88 aaPredicted RBP24.36■■□□□ 1.49
SSBP3-202ENST00000357475 DKK1O94907 266 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 MLYCDO95822 493 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 OTCP00480 354 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 GRK2P25098 689 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 CCR8P51685 355 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 PCDH1Q08174 1060 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 E2F2Q14209 437 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 KCNAB1Q14722 419 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 GPRIN3Q6ZVF9 776 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 PRSS42Q7Z5A4 293 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 CUZD1Q86UP6 607 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 C19orf47Q8N9M1 422 aaKnown RBP24.36■■□□□ 1.49
SSBP3-202ENST00000357475 MAGEB18Q96M61 343 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 CAPS2Q9BXY5 557 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 PELI2Q9HAT8 420 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 SLCO1B3Q9NPD5 702 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 TMEM184CQ9NVA4 438 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 SEMA5BQ9P283 1151 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 KLK4Q9Y5K2 254 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 KIF26BQ2KJY2 2108 aa24.36■■□□□ 1.49
SSBP3-202ENST00000357475 TMEM114B3SHH9 223 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 TMEM233B4DJY2 109 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 LCMT2O60294 686 aaKnown RBP24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CEACAM1P13688 526 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 TCHHL1Q5QJ38 904 aaPredicted RBP24.35■■□□□ 1.49
SSBP3-202ENST00000357475 PHF19Q5T6S3 580 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 FBXO42Q6P3S6 717 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ARHGAP22Q7Z5H3 698 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 MILR1Q7Z6M3 343 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 RAB3IL1Q8TBN0 382 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 LRRC8CQ8TDW0 803 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ZNF490Q9ULM2 529 aaPredicted RBP24.35■■□□□ 1.49
SSBP3-202ENST00000357475 KLF11O14901 512 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CLDN9O95484 217 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 HSPA4LO95757 839 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CASP2P42575 452 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 REEP5Q00765 189 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 E2F1Q01094 437 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ZFP36L1Q07352 338 aaKnown RBP24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CYP4F3Q08477 520 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 TBCCQ15814 346 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 DEFB110Q30KQ9 67 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CDCP2Q5VXM1 449 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 TRIM42Q8IWZ5 723 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ZNF781Q8N8C0 355 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 CDYL2Q8N8U2 506 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 L3MBTL4Q8NA19 623 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ZUFSPQ96AP4 578 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 PTCD3Q96EY7 689 aaKnown RBP24.35■■□□□ 1.49
SSBP3-202ENST00000357475 TRMOQ9BU70 441 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 EHD1Q9H4M9 534 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 ZDHHC2Q9UIJ5 367 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 PILRAQ9UKJ1 303 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 SNX7Q9UNH6 387 aa24.35■■□□□ 1.49
SSBP3-202ENST00000357475 FFAR3O14843 346 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 GPR42O15529 346 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 FKBP9O95302 570 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 ESRRBO95718 433 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 STATHP02808 62 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 CTSBP07858 339 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 EBLN1P0CF75 366 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 BCL6P41182 706 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 OCRLQ01968 901 aa24.34■■□□□ 1.49
SSBP3-202ENST00000357475 COL9A2Q14055 689 aaPredicted RBP24.34■■□□□ 1.49
SSBP3-202ENST00000357475 CPSF6Q16630 551 aaKnown RBP eCLIP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms