RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 RAI2Q9Y5P3 530 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF236Q9UL36 1845 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 GLTPD2A6NH11 291 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 INSIG1O15503 277 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 PDGFAP04085 211 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 IRF1P10914 325 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 IL12RB1P42701 662 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 MAPK12P53778 367 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 GABARAPL2P60520 117 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 TRAF3Q13114 568 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 CBX2Q14781 532 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 CARD16Q5EG05 197 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 GPR153Q6NV75 609 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 SUSD1Q6UWL2 747 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ANGPTL8Q6UXH0 198 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 Q6ZPB1 254 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 DPY19L3Q6ZPD9 716 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF467Q7Z7K2 595 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 CDH24Q86UP0 819 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF280BQ86YH2 543 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 HIPK1Q86Z02 1210 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 IFNL1Q8IU54 200 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 MSRB3Q8IXL7 192 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 RGL4Q8IZJ4 473 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 AADATQ8N5Z0 425 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 TTC29Q8NA56 475 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 C7orf57Q8NEG2 295 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 BRI3BPQ8WY22 251 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 PHOX2BQ99453 314 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 KATNAL1Q9BW62 490 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 BOCQ9BWV1 1114 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 SLIRPQ9GZT3 109 aaKnown RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 DCSTAMPQ9H295 470 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 FBXO44Q9H4M3 255 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 LRTM1Q9HBL6 345 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ANKHQ9HCJ1 492 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 DCAF13Q9NV06 445 aaKnown RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 USE1Q9NZ43 259 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 TMEFF2Q9UIK5 374 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZFP37Q9Y6Q3 630 aaPredicted RBP8.01□□□□□ -1.13
CDC42SE1-201ENST00000357235 LOC285556D6RIA3 1793 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 A0A096LPI6 279 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 WASH4PA8MWX3 477 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 LEUTXA8MZ59 168 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 LOC730098B7Z3J9 87 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ARNTLO00327 626 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SCELO95171 688 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ALPIP09923 528 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 IL7P13232 177 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 C21orf33P30042 268 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 S100A3P33764 101 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 IDH2P48735 452 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 MASP1P48740 699 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NUDT6P53370 316 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CASP9P55211 416 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 BNC1Q01954 994 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TAF1AQ15573 450 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SOWAHCQ53LP3 525 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 LAIR1Q6GTX8 287 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 GDF6Q6KF10 455 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 GALNT11Q8NCW6 608 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SETD9Q8NE22 299 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TMEM80Q96HE8 168 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 RDH12Q96NR8 316 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DPH2Q9BQC3 489 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 KRT84Q9NSB2 600 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 C1orf109Q9NX04 203 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TAS2R9Q9NYW1 312 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 GLTPQ9NZD2 209 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 AGO1Q9UL18 857 aaKnown RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 BTBD3Q9Y2F9 522 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 SNX8Q9Y5X2 465 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TANC1Q9C0D5 1861 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 AGAP5A6NIR3 686 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 RFXANKO14593 260 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ANKRD28O15084 1053 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 BNIP3LO60238 219 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF780AO75290 641 aaPredicted RBP8□□□□□ -1.13
CDC42SE1-201ENST00000357235 GLUD1P00367 558 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 EPOP01588 193 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TACR2P21452 398 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CDKN2CP42773 168 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DAPP51397 102 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TAF12Q16514 161 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 NXNL2Q5VZ03 156 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 CPZQ66K79 652 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF621Q6ZSS3 439 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 DENND1CQ8IV53 801 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 ZNF683Q8IZ20 524 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PYCR2Q96C36 320 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PYURFQ96I23 114 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 PKMYT1Q99640 499 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 APOL4Q9BPW4 351 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 EBPLQ9BY08 206 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 TM6SF2Q9BZW4 377 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 RNF167Q9H6Y7 350 aa8□□□□□ -1.13
CDC42SE1-201ENST00000357235 KAT8Q9H7Z6 458 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms