RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 GADD45AP24522 165 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 HNRNPFP52597 415 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 SLC3A1Q07837 685 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 BAIAP2L2Q6UXY1 529 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 USP50Q70EL3 339 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 JAGN1Q8N5M9 183 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 S100PBPQ96BU1 408 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 GBA3Q9H227 469 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 NUDT15Q9NV35 164 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 NPIPA1Q9UND3 350 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 CPED1A4D0V7 1026 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 OR4Q2P0C623 313 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 MATN1P21941 496 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 GLUD2P49448 558 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 CTBP2P56545 445 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 AADACL4Q5VUY2 407 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 TMEM214Q6NUQ4 689 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 RELL1Q8IUW5 271 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 CD300LFQ8TDQ1 290 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 ZIM2Q9NZV7 527 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 C9J4A7 227 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 MPIP34949 423 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 WDR4P57081 412 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 GABARAPL2P60520 117 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 SLC13A3Q8WWT9 602 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 ARNTL2Q8WYA1 636 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 GOLGA2P5Q9HBQ8 144 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 HMGN1P05114 100 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 ZSCAN4Q8NAM6 433 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 KLHL6Q8WZ60 621 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 HMCESQ96FZ2 354 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 MTERF1Q99551 399 aaKnown RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 MKKSQ9NPJ1 570 aaPredicted RBP11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 SPATA31A5Q5VU36 1347 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 SPATA31A7Q8IWB4 1347 aa11.23□□□□□ -0.61
SPTBN1-202ENST00000356805 XKP51811 444 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 NRLP54845 237 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 PER3P56645 1201 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ERVK-8P63133 956 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 CHIT1Q13231 466 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF267Q14586 743 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ANKRD13BQ86YJ7 626 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 LPIN3Q9BQK8 851 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SDCBP2Q9H190 292 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 GLOD4Q9HC38 313 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 TMEM59LQ9UK28 342 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 FXYD6-FXYD2A0A087WZ82 144 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 A0A1B0GVC2 190 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 BTBD19C9JJ37 291 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 UAP1L1Q3KQV9 507 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SMYD5Q6GMV2 418 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SERPINA9Q86WD7 417 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 GLIS3Q8NEA6 775 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 FBXO22Q8NEZ5 403 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 NINJ1Q92982 152 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ZBED6CLQ96FA7 236 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 HYLS1Q96M11 299 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 FXYD6Q9H0Q3 95 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 FOLH1BQ9HBA9 442 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ZNF282Q9UDV7 671 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 C2orf92A0A1B0GVN3 265 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 TMEM150CB9EJG8 249 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 B4GALT5O43286 388 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ARL6IP5O75915 188 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 HPRP00739 348 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 PKMP14618 531 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 AGXTP21549 392 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 MSR1P21757 451 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 DSC2Q02487 901 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 GRHL2Q6ISB3 625 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SPATC1Q76KD6 591 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 KCTD9Q7L273 389 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 KLHL36Q8N4N3 616 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 OR5J2Q8NH18 312 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SLC45A3Q96JT2 553 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 PTCH2Q9Y6C5 1203 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 GOT2P00505 430 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 PROZP22891 400 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 CSTF2P33240 577 aaKnown RBP eCLIP11.22□□□□□ -0.618e-7■■■■□ 24.8
SPTBN1-202ENST00000356805 SEMG2Q02383 582 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 CLCQ05315 142 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ST3GAL4Q11206 333 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 TMEM121BQ9BXQ6 578 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 PCBD2Q9H0N5 130 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 WASF3Q9UPY6 502 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 ATRNO75882 1429 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 HTR3EA5X5Y0 456 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 NDUFS4O43181 175 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 STATHP02808 62 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 HK1P19367 917 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 VAMP1P23763 118 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 KLF1Q13351 362 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 GRK1Q15835 563 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 TMEM164Q5U3C3 297 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 FSTL4Q6MZW2 842 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 SETD7Q8WTS6 366 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-202ENST00000356805 KAZALD1Q96I82 304 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms