RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 C17orf62Q9BQA9 187 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 ATG10Q9H0Y0 220 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 ZNF304Q9HCX3 659 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 SNX24Q9Y343 169 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 ZNF451Q9Y4E5 1061 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 COMMD10Q9Y6G5 202 aa15.93■□□□□ 0.14
PDLIM7-201ENST00000355572 CTAGE15A4D2H0 777 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 ALBP02768 609 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 FDXRP22570 491 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 RRADP55042 308 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 MAT1AQ00266 395 aaKnown RBP15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 PLEKHN1Q494U1 663 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 HECTD2Q5U5R9 776 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 YOD1Q5VVQ6 348 aaPredicted RBP15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 PCGF5Q86SE9 256 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 CTAGE6Q86UF2 777 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 C19orf60Q96EN9 201 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 CABS1Q96KC9 395 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 KRT12Q99456 494 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 WDR54Q9H977 334 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 ANKMY1Q9P2S6 941 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 CDC23Q9UJX2 597 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 MAP4K5Q9Y4K4 846 aa15.92■□□□□ 0.14
PDLIM7-201ENST00000355572 IGLV3-12A0A075B6K2 115 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 A0A0A6YYC8 382 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 FEZF1A0PJY2 475 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 TTLL8A6PVC2 850 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 E7ESA3 106 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 I3L1I5 382 aaPredicted RBP15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 ZBTB14O43829 449 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 LCMT2O60294 686 aaKnown RBP15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 JRKO75564 520 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 TTC4O95801 387 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 CELA2AP08217 269 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 ZGLP1P0C6A0 271 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 RNF224P0DH78 156 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 CSNK1G2P78368 415 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 C2orf54Q08AI8 447 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 MYBPC3Q14896 1274 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 FAM214AQ32MH5 1076 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 PRAMEF13Q5VWM6 474 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 AGTRAPQ6RW13 159 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 PARP9Q8IXQ6 854 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 GPATCH11Q8N954 259 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 FBXO36Q8NEA4 188 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 OR11G2Q8NGC1 345 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 CPT1CQ8TCG5 803 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 COL26A1Q96A83 441 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 PYCR2Q96C36 320 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 SNF8Q96H20 258 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 OR4K3Q96R72 315 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 SPNS1Q9H2V7 528 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 TAS2R13Q9NYV9 303 aa15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDLIM7-201ENST00000355572 EFCAB8A8MWE9 144 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 EIF3FO00303 357 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 PEX12O00623 359 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 EZRP15311 586 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 FBLP22087 321 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 GNLYP22749 145 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 HSD17B2P37059 387 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 BCL6P41182 706 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 SOX8P57073 446 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 PDIA2Q13087 525 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 NAE1Q13564 534 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 TRADDQ15628 312 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 INPP5JQ15735 1006 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 HIF1AQ16665 826 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 MUM1Q2TAK8 710 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 VWA5B1Q5TIE3 1220 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 CAPN12Q6ZSI9 719 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 SYDE1Q6ZW31 735 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 ADCK2Q7Z695 626 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 GALNT7Q86SF2 657 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 PDIK1LQ8N165 341 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 ALKBH8Q96BT7 664 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 FER1L6-AS2Q96M78 137 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 IP6K3Q96PC2 410 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 MCMBPQ9BTE3 642 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 CRB3Q9BUF7 120 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 SGPP1Q9BX95 441 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 DPH5Q9H2P9 285 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 PPANQ9NQ55 473 aaKnown RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 CCDC177Q9NQR7 707 aaPredicted RBP15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 GRHL1Q9NZI5 618 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 NTNG1Q9Y2I2 539 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 PCDHGB7Q9Y5F8 929 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 FLNCQ14315 2725 aa15.9■□□□□ 0.14
PDLIM7-201ENST00000355572 FLNBO75369 2602 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 OR2W5A6NFC9 320 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 CXorf49A8MYA2 514 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 CCDC188H7C350 402 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 RAD51CO43502 376 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 DPM1O60762 260 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 DNAJB6O75190 326 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 CDH1P12830 882 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 GMPRP36959 345 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 SLC26A3P40879 764 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 ABATP80404 500 aa15.89■□□□□ 0.13
PDLIM7-201ENST00000355572 MEF2AQ02078 507 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms