RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 UBASH3BQ8TF42 649 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ARRDC3Q96B67 414 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 TM9SF2Q99805 663 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 BPIFA1Q9NP55 256 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 HEBP1Q9NRV9 189 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CACNA2D2Q9NY47 1150 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SORCS3Q9UPU3 1222 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 TRBV5-4A0A0C4DH59 114 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ATP6AP2A0A1C7CYW4 349 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 PEX14O75381 377 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ATP6AP2O75787 350 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 FKBP9O95302 570 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SERPINE1P05121 402 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 C1SP09871 688 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CFL1P23528 166 aaKnown RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MC4RP32245 332 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 EVI2BP34910 448 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CREB5Q02930 508 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ZDHHC20Q5W0Z9 365 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 PTCRAQ6ISU1 281 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CNSTQ6PJW8 725 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 TBC1D21Q8IYX1 336 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 CCNYL1Q8N7R7 359 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 RIT1Q92963 219 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 MARC2Q969Z3 335 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 NXNL1Q96CM4 212 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 HDAC8Q9BY41 377 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 UCK2Q9BZX2 261 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 RSPH9Q9H1X1 276 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 POLMQ9NP87 494 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 IL26Q9NPH9 171 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 SNX15Q9NRS6 342 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 NFKBIL1Q9UBC1 381 aaPredicted RBP9.81□□□□□ -0.84
SYNE1-203ENST00000354674 COPG2Q9UBF2 871 aa9.81□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF701M0R085 212 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 NOS1APO75052 506 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PRKD3O94806 890 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 EGFP01133 1207 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 EPHX1P07099 455 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 ASGR2P07307 311 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 SRFP11831 508 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 DDCP20711 480 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 ATP6V1B2P21281 511 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TYK2P29597 1187 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CRHR1P34998 444 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 MMP12P39900 470 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CLCN5P51795 746 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 SLC7A2P52569 658 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 METAP1P53582 386 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 RHDQ02161 417 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CACNG1Q06432 222 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CAPRIN1Q14444 709 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 IER5LQ5T953 404 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 XAF1Q6GPH4 301 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TBPL2Q6SJ96 375 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 GDPD3Q7L5L3 318 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 KCTD20Q7Z5Y7 419 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CLEC14AQ86T13 490 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PLD6Q8N2A8 252 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 OR6F1Q8NGZ6 308 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CDC26Q8NHZ8 85 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 C17orf62Q9BQA9 187 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 EFHD1Q9BUP0 239 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CDADC1Q9BWV3 514 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 ARMC1Q9NVT9 282 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CYB5R1Q9UHQ9 305 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PRPF19Q9UMS4 504 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PRUNE2Q8WUY3 3088 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PLK4O00444 970 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 AREL1O15033 823 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 NARSO43776 548 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 XPNPEP2O43895 674 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 WISP3O95389 354 aaPredicted RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 MPOP05164 745 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 MSH3P20585 1137 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 MYF6P23409 242 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 AZGP1P25311 298 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PSMB9P28065 219 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 RRM2P31350 389 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TMBIM6P55061 237 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 DCDC1P59894 354 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TAB1Q15750 504 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 C2orf27AQ580R0 203 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TOR2AQ5JU69 321 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 HABP4Q5JVS0 413 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PSAPL1Q6NUJ1 521 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 TMEM151BQ8IW70 566 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PIANPQ8IYJ0 282 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PGAM4Q8N0Y7 254 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 GPR26Q8NDV2 337 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PROX1Q92786 737 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 FAM131CQ96AQ9 280 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PPP1R16AQ96I34 528 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 OMDQ99983 421 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 NUFIP1Q9UHK0 495 aaKnown RBP9.8□□□□□ -0.84
SYNE1-203ENST00000354674 CFL2Q9Y281 166 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 PLXNA2O75051 1894 aa9.8□□□□□ -0.84
SYNE1-203ENST00000354674 FAM95CA0A1B0GW59 222 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TRIM77I1YAP6 450 aa9.79□□□□□ -0.84
SYNE1-203ENST00000354674 TRIM38O00635 465 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms