RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 CA5BQ9Y2D0 317 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 FIS1Q9Y3D6 152 aa7.97□□□□□ -1.13
CD44-205ENST00000352818 FN1P02751 2386 aaKnown RBP7.96□□□□□ -1.13
CD44-205ENST00000352818 RP1P56715 2156 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TTC34A8MYJ7 566 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 CFAP99D6REC4 459 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 K7ESM1 405 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 AIM2O14862 343 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 HNRNPRO43390 633 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 LATO43561 262 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 LEFTY1O75610 366 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 PIAS2O75928 621 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 WDR47O94967 919 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 OTCP00480 354 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 C8GP07360 202 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 CTSLP07711 333 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ALDOCP09972 364 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 IDO1P14902 403 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 VCLP18206 1134 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TSPAN8P19075 237 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 MSH3P20585 1137 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 AOAHP28039 575 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 MMP12P39900 470 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 VHLP40337 213 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ETV5P41161 510 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 PTDSS1P48651 473 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 AGTR2P50052 363 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 FOXA1P55317 472 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ST8SIA6P61647 398 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 B4GALNT1Q00973 533 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 RALGDSQ12967 914 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 MRPL49Q13405 166 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 ART3Q13508 389 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 RBBP7Q16576 425 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 SPATS1Q496A3 300 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 AGKQ53H12 422 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 HENMT1Q5T8I9 393 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 REP15Q6BDI9 236 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 C8orf82Q6P1X6 216 aaPredicted RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 GK5Q6ZS86 529 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TMPRSS9Q7Z410 1059 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 GOLGA7Q7Z5G4 137 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 HEATR4Q86WZ0 1026 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 GALNT13Q8IUC8 556 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 RASGRP3Q8IV61 690 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 SLC34A3Q8N130 599 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TCAIMQ8N3R3 496 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TRAM1L1Q8N609 369 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TMIEQ8NEW7 156 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 CYB5D2Q8WUJ1 264 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ROPN1LQ96C74 230 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 LURAP1Q96LR2 239 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 MDFIQ99750 246 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 HGH1Q9BTY7 390 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ZSCAN5AQ9BUG6 496 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 MRPL1Q9BYD6 325 aaKnown RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 AKTIPQ9H8T0 292 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 WDR41Q9HAD4 459 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 PREBQ9HCU5 417 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 PCDH12Q9NPG4 1184 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 SEMA4BQ9NPR2 832 aaPredicted RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 SDR39U1Q9NRG7 319 aaPredicted RBP7.96□□□□□ -1.14
CD44-205ENST00000352818 AIG1Q9NVV5 245 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 NLGN3Q9NZ94 848 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 BCAP29Q9UHQ4 241 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 ZNF225Q9UK10 706 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 POMPQ9Y244 141 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 TP53TG5Q9Y2B4 290 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 PIKFYVEQ9Y2I7 2098 aa7.96□□□□□ -1.14
CD44-205ENST00000352818 EDDM13A0A1B0GTR0 161 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 CPED1A4D0V7 1026 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 C9orf172C9J069 976 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 H0Y3Z8 333 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 NTN3O00634 580 aaPredicted RBP7.95□□□□□ -1.14
CD44-205ENST00000352818 PPP6CO00743 305 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 FBP2O00757 339 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 MRASO14807 208 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 TAPBPO15533 448 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 CRCPO75575 148 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 PDE5AO76074 875 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 FTH1P02794 183 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 DNTTP04053 509 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 PRNPP04156 253 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 SNRPB2P08579 225 aaKnown RBP7.95□□□□□ -1.14
CD44-205ENST00000352818 ATP1B2P14415 290 aaPredicted RBP7.95□□□□□ -1.14
CD44-205ENST00000352818 ANPEPP15144 967 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 TIMP2P16035 220 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 PCSK2P16519 638 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 ITIH1P19827 911 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 ITGB7P26010 798 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 GGT5P36269 586 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 MAPK9P45984 424 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 ERVK-8P63133 956 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 FOXM1Q08050 763 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 TRAF3Q13114 568 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 GTF2H2Q13888 395 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 CCNIQ14094 377 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 LRP8Q14114 963 aa7.95□□□□□ -1.14
CD44-205ENST00000352818 PDCD4Q53EL6 469 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms