RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 NR1D2Q14995 579 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SUZ12Q15022 739 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DUOXA1Q1HG43 343 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DGKKQ5KSL6 1271 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 WDR45BQ5MNZ6 344 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CLVS1Q8IUQ0 354 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SCAIQ8N9R8 606 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 MAGEE2Q8TD90 523 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 ZUFSPQ96AP4 578 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CAPN10Q9HC96 672 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 EXOSC4Q9NPD3 245 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 GRXCR2A6NFK2 248 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 IQCF5A8MTL0 148 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 UGT2B15P54855 530 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 HSF5Q4G112 596 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 C6orf183Q5T699 404 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 TMIGD1Q6UXZ0 262 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 ATG14Q6ZNE5 492 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 FGF13Q92913 245 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF347Q96SE7 839 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SLC38A3Q99624 504 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 PHF11Q9UIL8 331 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SAMHD1Q9Y3Z3 626 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DICER1Q9UPY3 1922 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 FABP3P05413 133 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 RAP2AP10114 183 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DCDC1P59894 354 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 MFSD6LQ8IWD5 586 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CHST14Q8NCH0 376 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SCAMP4Q969E2 229 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 FUBP1Q96AE4 644 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 NELL2Q99435 816 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 IRGMA1A4Y4 181 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 G3V2T6 193 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CXCR6O00574 342 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 ADAMDEC1O15204 470 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 IFNA16P05015 189 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF806P0C7X5 589 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 C1GALT1C1LP0DN25 315 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 POU1F1P28069 291 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 FBXO48Q5FWF7 155 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DRAXINQ8NBI3 349 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CD200R1Q8TD46 325 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SPATA9Q9BWV2 254 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 PRDM8Q9NQV8 689 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 LYARQ9NX58 379 aaKnown RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 GPR34Q9UPC5 381 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SMIM31A0A1B0GVY4 71 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 PRORSD1PA6NEY8 169 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 HOXC11O43248 304 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 LYNP07948 512 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 CDH1P12830 882 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 NCF4Q15080 339 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SPESP1Q6UW49 350 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SPPL2CQ8IUH8 684 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 DCBLD1Q8N8Z6 715 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 FAM174AQ8TBP5 190 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SLC39A3Q9BRY0 314 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 PITHD1Q9GZP4 211 aaPredicted RBP11.81□□□□□ -0.52
SMAD9-201ENST00000350148 SLC7A8Q9UHI5 535 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 STOML2Q9UJZ1 356 aa11.81□□□□□ -0.52
SMAD9-201ENST00000350148 HIDE1A8MVS5 230 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 ZNF217O75362 1048 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 KLKB1P03952 638 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 EN2P19622 333 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 AVPR1BP47901 424 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 RFX3P48380 749 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 EFR3AQ14156 821 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 ADGRE1Q14246 886 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 SFRP1Q8N474 314 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 C10orf53Q8N6V4 93 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 UTP15Q8TED0 518 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 UBASH3BQ8TF42 649 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 MRPL38Q96DV4 380 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 DPEP2Q9H4A9 486 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NEUROD4Q9HD90 331 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 ACTR3BQ9P1U1 418 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NPIPB15A6NHN6 443 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 DUXAA6NLW8 204 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NDUFB5O43674 189 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 GSTM2P28161 218 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 DGKEP52429 567 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 INHBCP55103 352 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 C6orf136Q5SQH8 315 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TMEM198Q66K66 360 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NEK5Q6P3R8 708 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 COL26A1Q96A83 441 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TRIM43Q96BQ3 446 aaPredicted RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 TCEAL4Q96EI5 215 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 AIG1Q9NVV5 245 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 MARK1Q9P0L2 795 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 PCTPQ9UKL6 214 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 CDC14AQ9UNH5 594 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 AP4B1Q9Y6B7 739 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 H3BNH8 94 aa11.8□□□□□ -0.52
SMAD9-201ENST00000350148 SMAD6O43541 496 aaKnown RBP11.8□□□□□ -0.52
SMAD9-201ENST00000350148 NUAK1O60285 661 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms