RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DDX47Q9H0S4 455 aaKnown RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 PPANQ9NQ55 473 aaKnown RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 TRMT6Q9UJA5 497 aaKnown RBP11.84□□□□□ -0.51
SGCA-202ENST00000344627 SNX12Q9UMY4 172 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 DHRS7Q9Y394 339 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 NEU2Q9Y3R4 380 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 COMMD10Q9Y6G5 202 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 NUP210LQ5VU65 1888 aa11.84□□□□□ -0.51
SGCA-202ENST00000344627 SCN3AQ9NY46 2000 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 OR2A25A4D2G3 310 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 VSTM2BA6NLU5 285 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 BANF1O75531 89 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 MED26O95402 600 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ANXA5P08758 320 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 MPC1LP0DKB6 136 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ENO3P13929 434 aaPredicted RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 PGAM1P18669 254 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 PRDX1Q06830 199 aaKnown RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 ZNF169Q14929 603 aaPredicted RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 BBS9Q3SYG4 887 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 RNASEH2BQ5TBB1 312 aaKnown RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 ICE2Q659A1 982 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 UGT3A1Q6NUS8 523 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 PIWIL4Q7Z3Z4 852 aaKnown RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 PCGF5Q86SE9 256 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 KCNMB4Q86W47 210 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 LMNTD2Q8IXW0 634 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 AGGF1Q8N302 714 aaeCLIP11.83□□□□□ -0.52
SGCA-202ENST00000344627 CSNK1A1LQ8N752 337 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 DNAJB14Q8TBM8 379 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 STT3BQ8TCJ2 826 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ZNF480Q8WV37 535 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ASB11Q8WXH4 323 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 KCNJ9Q92806 393 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ALKBH8Q96BT7 664 aaKnown RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 CAPZA3Q96KX2 299 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 NDNQ99608 321 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 SPSB2Q99619 263 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 KLHL42Q9P2K6 505 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 ZNF282Q9UDV7 671 aaPredicted RBP11.83□□□□□ -0.52
SGCA-202ENST00000344627 PCYOX1Q9UHG3 505 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 HS3ST3B1Q9Y662 390 aa11.83□□□□□ -0.52
SGCA-202ENST00000344627 UNC79Q9P2D8 2635 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 PABPN1LA6NDY0 278 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 CES2O00748 559 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 TXNDC9O14530 226 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 SOCS6O14544 535 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 DNALI1O14645 258 aaPredicted RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 FFAR3O14843 346 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 GPR42O15529 346 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 HPP00738 406 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 UQCRHP07919 91 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 ZGLP1P0C6A0 271 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 ERGP11308 486 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 DCTP40126 519 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 MAGEA3P43357 314 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 RGS4P49798 205 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 RELAQ04206 551 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 CRYMQ14894 314 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 VWA2Q5GFL6 755 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 HP1BP3Q5SSJ5 553 aaPredicted RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 KIRREL2Q6UWL6 708 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 ISLR2Q6UXK2 745 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 CYHR1Q6ZMK1 362 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 CUZD1Q86UP6 607 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 PAQR7Q86WK9 346 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 CD200R1Q8TD46 325 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 MCOLN3Q8TDD5 553 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 FAR1Q8WVX9 515 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 C19orf60Q96EN9 201 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 MMABQ96EY8 250 aaPredicted RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 CFAP36Q96G28 342 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 EBNA1BP2Q99848 306 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 TAS2R13Q9NYV9 303 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 TRPC4Q9UBN4 977 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 C3orf18Q9UK00 162 aa11.82□□□□□ -0.52
SGCA-202ENST00000344627 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 RUVBL1Q9Y265 456 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 SPTAN1Q13813 2472 aaKnown RBP11.82□□□□□ -0.52
SGCA-202ENST00000344627 SPTBN1Q01082 2364 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 IGKV1-8A0A0C4DH67 115 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 A0A1W2PQ72 361 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 A1L4Q6 167 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 E7ENX8 843 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 H7BY64 318 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 GFYI3L273 518 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 MAP2K7O14733 419 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 HNRNPRO43390 633 aaKnown RBP11.81□□□□□ -0.52
SGCA-202ENST00000344627 TTC4O95801 387 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 CLDN1O95832 211 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 STATHP02808 62 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 HEXBP07686 556 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 CYC1P08574 325 aa11.81□□□□□ -0.52
SGCA-202ENST00000344627 ICAM2P13598 275 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms