RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MYOCQ99972 504 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CXXC1Q9P0U4 656 aaPredicted RBP14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 AASSQ9UDR5 926 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 C3orf18Q9UK00 162 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 ORC6Q9Y5N6 252 aa14.4□□□□□ -0.1
VIPAS39-202ENST00000343765 CXorf51AA0A1B0GTR3 108 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 EFCAB14O75071 495 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 FKBP9O95302 570 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CD247P20963 164 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 DCKP27707 260 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CSTF3Q12996 717 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 DMC1Q14565 340 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 C6orf141Q5SZD1 244 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 FKBP9P1Q75LS8 142 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CEP68Q76N32 757 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 C12orf40Q86WS4 652 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MRPL43Q8N983 215 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 PJA1Q8NG27 643 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SAMD11Q96NU1 681 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 DGCR6LQ9BY27 220 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CCDC90BQ9GZT6 254 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 RIBC2Q9H4K1 309 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 USE1Q9NZ43 259 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TMEFF2Q9UIK5 374 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 HELZP42694 1942 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 GNG14A0A1W2PPG7 69 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CARNS1A5YM72 827 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SAP18O00422 153 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 NOL3O60936 208 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CCNDBP1O95273 360 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 ANXA4P09525 319 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 NUDT7P0C024 238 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 HLA-EP13747 358 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CEBPBP17676 345 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MMP12P39900 470 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 ENTPD1P49961 510 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 RPS6KA3P51812 740 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MTAPQ13126 283 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SIM2Q14190 667 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 LDLRAP1Q5SW96 308 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TECPR1Q7Z6L1 1165 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 DCP2Q8IU60 420 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 ZZZ3Q8IYH5 903 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SYTL1Q8IYJ3 562 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 B4GALNT2Q8NHY0 566 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 HUS1BQ8NHY5 278 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CNIH3Q8TBE1 160 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 POF1BQ8WVV4 589 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TIFAQ96CG3 184 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 THAP11Q96EK4 314 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TPD52L3Q96J77 140 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CCDC138Q96M89 665 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 RDH12Q96NR8 316 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CCM2Q9BSQ5 444 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SPATA6Q9NWH7 488 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TBC1D14Q9P2M4 693 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SAMD4AQ9UPU9 718 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 RUVBL1Q9Y265 456 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MYO9BQ13459 2157 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 K7ESM1 405 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MYO1DO94832 1006 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 KCNK5O95279 499 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 IGFBP5P24593 272 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 IL5RAQ01344 420 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SRSF11Q05519 484 aaKnown RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 STARD3Q14849 445 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 VMACQ2NL98 169 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 XAF1Q6GPH4 301 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 ANGPTL8Q6UXH0 198 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 DPPA4Q7L190 304 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 TRAPPC5Q8IUR0 188 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 CHPFQ8IZ52 775 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 MAL2Q969L2 176 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 NEIL2Q969S2 332 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 LRRC3BQ96PB8 259 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 LHPPQ9H008 270 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 SH3BP4Q9P0V3 963 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 FAF1Q9UNN5 650 aaPredicted RBP14.39□□□□□ -0.11
VIPAS39-202ENST00000343765 BCKDKO14874 412 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SCN2BO60939 215 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 ABCB7O75027 752 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 NR4A1P22736 598 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 DDX6P26196 483 aaKnown RBP eCLIP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 TTKP33981 857 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 IRS1P35568 1242 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 TRPC1P48995 793 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 DGKGP49619 791 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 PRLHRP49683 370 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 RPS13P62277 151 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 RBM48Q5RL73 367 aaKnown RBP14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CATSPEREQ5SY80 951 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CPZQ66K79 652 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 GRHL2Q6ISB3 625 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 ERAP2Q6P179 960 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 SERPINA11Q86U17 422 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 PTOV1Q86YD1 416 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 HIPK1Q86Z02 1210 aa14.38□□□□□ -0.11
VIPAS39-202ENST00000343765 CFAP206Q8IYR0 622 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms