RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SPATA7Q9P0W8 599 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 ACTR3BQ9P1U1 418 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 MCM8Q9UJA3 840 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 RIMS3Q9UJD0 308 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 USP22Q9UPT9 525 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 POM121BA6NF01 834 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 ZNF839A8K0R7 811 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 ARPC2O15144 300 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 KCNJ13O60928 360 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 MYO1DO94832 1006 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 TPMTP51580 245 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 RAE1P78406 368 aaKnown RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 CCDC85BQ15834 202 aaPredicted RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 PGS1Q32NB8 556 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 LCN8Q6JVE9 175 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 SPPL2CQ8IUH8 684 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 C1orf52Q8N6N3 182 aaKnown RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 CHTF18Q8WVB6 975 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 C11orf24Q96F05 449 aaPredicted RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 SCARF2Q96GP6 870 aaPredicted RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 GAS2L1Q99501 681 aaPredicted RBP19.28■□□□□ 0.68
RTN1-202ENST00000342503 VCX3BQ9H321 246 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 MUC13Q9H3R2 512 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 PIF1Q9H611 641 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 CA5BQ9Y2D0 317 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 AP4S1Q9Y587 144 aa19.28■□□□□ 0.68
RTN1-202ENST00000342503 PRR19A6NJB7 356 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 SCAMP1O15126 338 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 AKAP10O43572 662 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 HOXC4P09017 264 aaPredicted RBP19.27■□□□□ 0.68
RTN1-202ENST00000342503 SLC7A1P30825 629 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 KIAA1024LP59773 190 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 MLF2Q15773 248 aaPredicted RBP19.27■□□□□ 0.68
RTN1-202ENST00000342503 OGFRL1Q5TC84 451 aaPredicted RBP19.27■□□□□ 0.68
RTN1-202ENST00000342503 TRIM69Q86WT6 500 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 PTRH1Q86Y79 214 aaKnown RBP19.27■□□□□ 0.68
RTN1-202ENST00000342503 MSRB3Q8IXL7 192 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 OR8J3Q8NGG0 315 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 HHIPQ96QV1 700 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 ACAT2Q9BWD1 397 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 FGF22Q9HCT0 170 aa19.27■□□□□ 0.68
RTN1-202ENST00000342503 NDRG2Q9UN36 371 aaKnown RBP19.27■□□□□ 0.68
RTN1-202ENST00000342503 AQP12BA6NM10 295 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 FOXE1O00358 373 aaPredicted RBP19.26■□□□□ 0.67
RTN1-202ENST00000342503 IDSP22304 550 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 HTR1EP28566 365 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 TFF2Q03403 129 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 CLCA4Q14CN2 919 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 C10orf62Q5T681 223 aaPredicted RBP19.26■□□□□ 0.67
RTN1-202ENST00000342503 DNAJC14Q6Y2X3 702 aaPredicted RBP19.26■□□□□ 0.67
RTN1-202ENST00000342503 AQP12AQ8IXF9 295 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 DENND6BQ8NEG7 585 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 GPR156Q8NFN8 814 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 MSANTD3Q96H12 275 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 PAIP1Q9H074 479 aaKnown RBP19.26■□□□□ 0.67
RTN1-202ENST00000342503 DMRT3Q9NQL9 472 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 SLC25A37Q9NYZ2 338 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.26■□□□□ 0.67
RTN1-202ENST00000342503 TAC3Q9UHF0 121 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 MAN2B2Q9Y2E5 1009 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 SNX13Q9Y5W8 968 aa19.26■□□□□ 0.67
RTN1-202ENST00000342503 FPGTO14772 594 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PRMT3O60678 531 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 NCK1P16333 377 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PRPS1L1P21108 318 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 SOX11P35716 441 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 OR4D2P58180 307 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 SPIN4Q56A73 249 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 SFT2D3Q587I9 215 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 RUNDC3AQ59EK9 446 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PDSS2Q86YH6 399 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 TMEM102Q8N9M5 508 aaPredicted RBP19.25■□□□□ 0.67
RTN1-202ENST00000342503 ZNF740Q8NDX6 193 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 FLCNQ8NFG4 579 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 CDC26Q8NHZ8 85 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 HMGB4Q8WW32 186 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 SMPDL3AQ92484 453 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 UBE2E3Q969T4 207 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 ITCHQ96J02 903 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 CAMK1GQ96NX5 476 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 KCNH6Q9H252 994 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 RMND5AQ9H871 391 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 CARS2Q9HA77 564 aaKnown RBP19.25■□□□□ 0.67
RTN1-202ENST00000342503 SERHLQ9NQF3 203 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 IMP3Q9NV31 184 aaKnown RBP19.25■□□□□ 0.67
RTN1-202ENST00000342503 TRBV5-3A0A0A0MS03 114 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 A0A1W2PPV9 198 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PRSS38A1L453 326 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 LRRC72A6NJI9 287 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 H0Y8X5 98 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 PEX1O43933 1283 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 B3GALT4O96024 378 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 MTHFD1P11586 935 aaKnown RBP19.25■□□□□ 0.67
RTN1-202ENST00000342503 UGT8Q16880 541 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 GTDC1Q4AE62 458 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 OR4F3Q6IEY1 312 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 ENPP7Q6UWV6 458 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 ANKRD46Q86W74 232 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 C17orf64Q86WR6 236 aa19.25■□□□□ 0.67
RTN1-202ENST00000342503 FAM129CQ86XR2 697 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms