RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 FBXL8Q96CD0 374 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 ISOC1Q96CN7 298 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 FOPNLQ96NB1 174 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 CCM2Q9BSQ5 444 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 OR51B5Q9H339 312 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 FANCEQ9HB96 536 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 CD320Q9NPF0 282 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 KPNA5O15131 536 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 XYLBO75191 536 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 EPN2O95208 641 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 DCTP40126 519 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 CDK9P50750 372 aaKnown RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 HTRA4P83105 476 aaPredicted RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 CYP27C1Q4G0S4 372 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 ATG9BQ674R7 924 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 PDE12Q6L8Q7 609 aaKnown RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 R3HCC1LQ7Z5L2 792 aaKnown RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 TECPR1Q7Z6L1 1165 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 GPR149Q86SP6 731 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 MMAAQ8IVH4 418 aaKnown RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 CCDC115Q96NT0 180 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 TMEM121BQ9BXQ6 578 aaPredicted RBP10□□□□□ -0.81
LIMA1-201ENST00000341247 RIBC2Q9H4K1 309 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 TMEM45AQ9NWC5 275 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 FAM118AQ9NWS6 357 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 GULP1Q9UBP9 304 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 RAPGEFL1Q9UHV5 662 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 ZNF639Q9UID6 485 aa10□□□□□ -0.81
LIMA1-201ENST00000341247 KIAA0355O15063 1070 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PRSS23O95084 383 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 OPN1SWP03999 348 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 GJA8P48165 433 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TUBA4AP68366 448 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 MC1RQ01726 317 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SP140Q13342 867 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 NFE2L1Q14494 772 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 GGTA1PQ4G0N0 100 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 CCNYL2Q5T2Q4 361 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 FAM109BQ6ICB4 259 aaPredicted RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 C8orf59Q8N0T1 100 aaPredicted RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 EID3Q8N140 333 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ZNF740Q8NDX6 193 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ZNF555Q8NEP9 628 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 BPIFB6Q8NFQ5 453 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 OR7G3Q8NG95 312 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SMG7Q92540 1137 aaKnown RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 DGCR6LQ9BY27 220 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TDRKHQ9Y2W6 561 aaKnown RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 A0A1W2PPW3 197 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PRR23AA6NEV1 266 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 MGAT4DA6NG13 374 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 GABRR3A8MPY1 467 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 FAM220BPB1ANY3 271 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PRPS1L1P21108 318 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TBPL1P62380 186 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 DUOXA1Q1HG43 343 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 CEP68Q76N32 757 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 DPPA4Q7L190 304 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 AADATQ8N5Z0 425 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 CNIH3Q8TBE1 160 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 CSGALNACT1Q8TDX6 532 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ZNF480Q8WV37 535 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ARRDC3Q96B67 414 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PYURFQ96I23 114 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 MBOAT4Q96T53 435 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 RAD9AQ99638 391 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 DUSP26Q9BV47 211 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SORBS1Q9BX66 1292 aaKnown RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ASIC5Q9NY37 505 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 KLHL42Q9P2K6 505 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PRKAG2Q9UGJ0 569 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PCYT1BQ9Y5K3 369 aaPredicted RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TCF20Q9UGU0 1960 aaKnown RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 DOCK9Q9BZ29 2069 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SCAMP1O15126 338 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 PSIP1O75475 530 aaKnown RBP9.99□□□□□ -0.81
LIMA1-201ENST00000341247 MYO1DO94832 1006 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ATE1O95260 518 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TNFRSF1BP20333 461 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 GZMMP51124 257 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 WNT3P56703 355 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 TCEA2Q15560 299 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 LDLRAP1Q5SW96 308 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 LRIF1Q5T3J3 769 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 USP51Q70EK9 711 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 THAP5Q7Z6K1 395 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ADHFE1Q8IWW8 467 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 WDR20Q8TBZ3 569 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 CCDC138Q96M89 665 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 OSBPL10Q9BXB5 764 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SPNS1Q9H2V7 528 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 ZNF451Q9Y4E5 1061 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 NUMA1Q14980 2115 aa9.99□□□□□ -0.81
LIMA1-201ENST00000341247 SLC16A5O15375 505 aa9.98□□□□□ -0.81
LIMA1-201ENST00000341247 XPNPEP2O43895 674 aa9.98□□□□□ -0.81
LIMA1-201ENST00000341247 ZBTB11O95625 1053 aaPredicted RBP9.98□□□□□ -0.81
LIMA1-201ENST00000341247 EPHA5P54756 1037 aa9.98□□□□□ -0.81
LIMA1-201ENST00000341247 IL5RAQ01344 420 aa9.98□□□□□ -0.81
LIMA1-201ENST00000341247 ABHD18Q0P651 414 aa9.98□□□□□ -0.81
LIMA1-201ENST00000341247 SLBPQ14493 270 aaKnown RBP eCLIP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms