RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 SH3BGRLO75368 114 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 STK16O75716 305 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TUBBP07437 444 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 ALAS2P22557 587 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
TUBD1-202ENST00000340993 SLC26A3P40879 764 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 BCL6P41182 706 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 SLC6A12P48065 614 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 HNMTP50135 292 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 PCBP4P57723 403 aaKnown RBP12.65□□□□□ -0.38
TUBD1-202ENST00000340993 FOXL2P58012 376 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 ARF3P61204 181 aaPredicted RBP12.65□□□□□ -0.38
TUBD1-202ENST00000340993 CDKL1Q00532 357 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TSNAXIP1Q2TAA8 658 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 HKDC1Q2TB90 917 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 FAM69BQ5VUD6 431 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 FBXO42Q6P3S6 717 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 LCTLQ6UWM7 567 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TIPARPQ7Z3E1 657 aaKnown RBP12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TDRPQ86YL5 185 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 GPR135Q8IZ08 494 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TEX9Q8N6V9 391 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 SLC38A9Q8NBW4 561 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 PDPRQ8NCN5 879 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 CABS1Q96KC9 395 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 ZFYVE21Q9BQ24 234 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 ASPSCR1Q9BZE9 553 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 DNAJC11Q9NVH1 559 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 SERTAD3Q9UJW9 196 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 PTBP2Q9UKA9 531 aaKnown RBP12.65□□□□□ -0.38
TUBD1-202ENST00000340993 PLCL2Q9UPR0 1127 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 ANGPTL3Q9Y5C1 460 aa12.65□□□□□ -0.38
TUBD1-202ENST00000340993 STMND1H3BQB6 276 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 NVLO15381 856 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RGS16O15492 202 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZSCAN9O15535 394 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 P2RX6O15547 441 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 OR1F1O43749 312 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 LCMT2O60294 686 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 SMIM24O75264 130 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RBP1P09455 135 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 SBK3P0C264 359 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 FGF5P12034 268 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CCND1P24385 295 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ITPKBP27987 946 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 HNF4AP41235 474 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 GABRA4P48169 554 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CSNK1G2P78368 415 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 FOXK2Q01167 660 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CDC16Q13042 620 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 IL11RAQ14626 422 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 PDK4Q16654 411 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 WASHC2DQ5SRD0 308 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZNF425Q6IV72 752 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 IL22RA1Q8N6P7 574 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RHEBL1Q8TAI7 183 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZCCHC10Q8TBK6 192 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 KCNE4Q8WWG9 221 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZUFSPQ96AP4 578 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZNF578Q96N58 590 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 NSUN5Q96P11 429 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RUFY1Q96T51 708 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 MRPL57Q9BQC6 102 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 HAUS8Q9BT25 410 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 DDA1Q9BW61 102 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 MRPL46Q9H2W6 279 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CNOT10Q9H9A5 744 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ACTR5Q9H9F9 607 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 OPTCQ9UBM4 332 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ZMIZ1Q9ULJ6 1067 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 FFAR3O14843 346 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 GPR42O15529 346 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CTIFO43310 598 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 KATNA1O75449 491 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 DXOO77932 396 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CCR8P51685 355 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ERVPABLB-1P60509 514 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ABATP80404 500 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 XKR6Q5GH73 641 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 ADNP2Q6IQ32 1131 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 LCN10Q6JVE6 187 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 TTLL10Q6ZVT0 673 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CCDC91Q7Z6B0 441 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 TRABD2AQ86V40 505 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CARFQ8N187 725 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 TCAIMQ8N3R3 496 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CCT6BQ92526 530 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 RERGQ96A58 199 aaPredicted RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 CDK15Q96Q40 435 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 EMCNQ9ULC0 261 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 SNX7Q9UNH6 387 aa12.64□□□□□ -0.39
TUBD1-202ENST00000340993 MRPS18BQ9Y676 258 aaKnown RBP12.64□□□□□ -0.39
TUBD1-202ENST00000340993 KCNE2Q9Y6J6 123 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms