RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 RSL1D1O76021 490 aaKnown RBP16.71■□□□□ 0.27
CLDN4-201ENST00000340958 GNSP15586 552 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 NXPH1P58417 271 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 IRX1P78414 480 aaPredicted RBP16.71■□□□□ 0.27
CLDN4-201ENST00000340958 ZNF33BQ06732 778 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 SF1Q15637 639 aaKnown RBP16.71■□□□□ 0.27
CLDN4-201ENST00000340958 MMEL1Q495T6 779 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 IL23RQ5VWK5 629 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 ICE2Q659A1 982 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 PAOXQ6QHF9 649 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 RINLQ6ZS11 566 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 SLC9B2Q86UD5 537 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 OR7G3Q8NG95 312 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 PATE1Q8WXA2 126 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 AIF1LQ9BQI0 150 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 BTBD10Q9BSF8 475 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 POT1Q9NUX5 634 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 OR6C2Q9NZP2 312 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 CPNE7Q9UBL6 633 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 POLR3HQ9Y535 204 aaPredicted RBP16.71■□□□□ 0.27
CLDN4-201ENST00000340958 ABCA7Q8IZY2 2146 aa16.71■□□□□ 0.27
CLDN4-201ENST00000340958 RIF1Q5UIP0 2472 aaKnown RBP16.71■□□□□ 0.27
CLDN4-201ENST00000340958 CFAP73A6NFT4 308 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 HNRNPKP61978 463 aaKnown RBP eCLIP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 CSTF3Q12996 717 aaKnown RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 RFTN2Q52LD8 501 aaPredicted RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 GK5Q6ZS86 529 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 HUS1BQ8NHY5 278 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 HMGCLL1Q8TB92 370 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 WDR20Q8TBZ3 569 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 GAB3Q8WWW8 586 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 MCUR1Q96AQ8 359 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 SLC7A6OSQ96CW6 309 aaPredicted RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 WDR34Q96EX3 536 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 RAB3IPQ96QF0 476 aaPredicted RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 PELI2Q9HAT8 420 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 SLC40A1Q9NP59 571 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 MRPS30Q9NP92 439 aaKnown RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 AIG1Q9NVV5 245 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 OTOGLQ3ZCN5 2332 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 A0A1W2PPV9 198 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 H7BY64 318 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 AIM2O14862 343 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 CCNDBP1O95273 360 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 XRCC1P18887 633 aaPredicted RBP16.7■□□□□ 0.26
CLDN4-201ENST00000340958 CNR2P34972 360 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 GPR18Q14330 331 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 HERC3Q15034 1050 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 LPAL2Q16609 132 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 TMIGD1Q6UXZ0 262 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 PRR23BQ6ZRT6 265 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 ASCL5Q7RTU5 278 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 ZFAND4Q86XD8 727 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 RNF175Q8N4F7 328 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 SUMF1Q8NBK3 374 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 PRAP1Q96NZ9 151 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 NMRK1Q9NWW6 199 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 VPS29Q9UBQ0 182 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 CCL27Q9Y4X3 112 aa16.7■□□□□ 0.26
CLDN4-201ENST00000340958 THADAQ6YHU6 1953 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SH3BGRLO75368 114 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SLC22A3O75751 556 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 LMNAP02545 664 aaKnown RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SNRPB2P08579 225 aaKnown RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CHRM5P08912 532 aaPredicted RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 GPX3P22352 226 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 MAPK1P28482 360 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CMPK1P30085 196 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 GRK3P35626 688 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 PRDX1Q06830 199 aaKnown RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 STX5Q13190 355 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 ART3Q13508 389 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SIM2Q14190 667 aaPredicted RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SMU1Q2TAY7 513 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 C10orf62Q5T681 223 aaPredicted RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CEP68Q76N32 757 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 ASRGL1Q7L266 308 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 OR9I1Q8NGQ6 314 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 OR10G6Q8NH81 332 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 C1orf216Q8TAB5 229 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SLC37A2Q8TED4 501 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SLC22A18Q96BI1 424 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CMTM7Q96FZ5 175 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 BRF2Q9HAW0 419 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 SDR39U1Q9NRG7 319 aaPredicted RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CUEDC1Q9NWM3 386 aaPredicted RBP16.69■□□□□ 0.26
CLDN4-201ENST00000340958 GPR45Q9Y5Y3 372 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 CEP192Q8TEP8 1941 aa16.69■□□□□ 0.26
CLDN4-201ENST00000340958 EP300Q09472 2414 aaPredicted RBP16.68■□□□□ 0.26
CLDN4-201ENST00000340958 MAGEB17A8MXT2 336 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 NR5A2O00482 541 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 MYO1DO94832 1006 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 G6PDP11413 515 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 HSD3B1P14060 373 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 HSD3B2P26439 372 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 ACADVLP49748 655 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 NUDT2P50583 147 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 KCNJ2P63252 427 aa16.68■□□□□ 0.26
CLDN4-201ENST00000340958 YBX1P67809 324 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms