RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 ZNF648Q5T619 568 aaPredicted RBP18.8■□□□□ 0.6
CDK13-202ENST00000340829 ZNF783Q6ZMS7 281 aa18.8■□□□□ 0.6
CDK13-202ENST00000340829 MRPL10Q7Z7H8 261 aaKnown RBP18.8■□□□□ 0.6
CDK13-202ENST00000340829 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
CDK13-202ENST00000340829 MTRRQ9UBK8 725 aa18.8■□□□□ 0.6
CDK13-202ENST00000340829 LOC100130705A0A1B0GUX0 176 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 TMEM115Q12893 351 aaPredicted RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 PCBP2Q15366 365 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDK13-202ENST00000340829 IQCCQ4KMZ1 466 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 TMIGD1Q6UXZ0 262 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 KRTCAP2Q8N6L1 136 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 KCNS3Q9BQ31 491 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 FAM120CQ9NX05 1096 aaKnown RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 RNF186Q9NXI6 227 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 AKAP7Q9P0M2 348 aaPredicted RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 IKZF2Q9UKS7 526 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 EFCAB9A8MZ26 197 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 NUDT6P53370 316 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 TRNP1Q6NT89 227 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 NPAS3Q8IXF0 933 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 KCT2Q8NC54 265 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 PRSS51A0A1B0GVH4 220 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 ALPPP05187 535 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 RPLP0P05388 317 aaKnown RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 MPIP34949 423 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 CGB2Q6NT52 195 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 FAM180AQ6UWF9 173 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 GPR151Q8TDV0 419 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 POF1BQ8WVV4 589 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 SMPDL3AQ92484 453 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 MARCH7Q9H992 704 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 KCNK6Q9Y257 313 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 DNAJC15Q9Y5T4 150 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 HEBP2Q9Y5Z4 205 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 MYOCOSA0A1B0GUC4 107 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 DFNA5O60443 496 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 SP140Q13342 867 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 IRAK1BP1Q5VVH5 260 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 PPP2R2DQ66LE6 453 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 SCAIQ8N9R8 606 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 OR52B6Q8NGF0 335 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 SLC5A11Q8WWX8 675 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 LIN28AQ9H9Z2 209 aaKnown RBP18.79■□□□□ 0.6
CDK13-202ENST00000340829 TBC1D17Q9HA65 648 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 ZNF222Q9UK12 451 aa18.79■□□□□ 0.6
CDK13-202ENST00000340829 CSNK2A2P19784 350 aaPredicted RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 ACRV1P26436 265 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 BNIP3Q12983 259 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 MEP1AQ16819 746 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 TIGD6Q17RP2 521 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 AKAP14Q86UN6 197 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 TICAM1Q8IUC6 712 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 RACGAP1Q9H0H5 632 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 TOR3AQ9H497 397 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 RPF2Q9H7B2 306 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 ZSCAN32Q9NX65 697 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 NDUFS4O43181 175 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 NPPAP01160 153 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 SLC13A2Q13183 592 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 CLLU1OSQ5K130 101 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 TTLQ8NG68 377 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 OR4K1Q8NGD4 311 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 IPCEF1Q8WWN9 437 aaPredicted RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 GEMIN6Q8WXD5 167 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 RFKQ969G6 155 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 RIPOR3Q96MK2 946 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 MCUBQ9NWR8 336 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 MYH7BA7E2Y1 1941 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 SNX4O95219 450 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 GCAP28676 217 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 SH3BP2P78314 561 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 CRB2Q5IJ48 1285 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 ISCA2Q86U28 154 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 ZNF433Q8N7K0 673 aaPredicted RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 ZNF641Q96N77 438 aaPredicted RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 MRTO4Q9UKD2 239 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 KHDRBS3O75525 346 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 C6orf47O95873 294 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 GRSF1Q12849 480 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDK13-202ENST00000340829 CEACAM20Q6UY09 585 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 ERI1Q8IV48 349 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 PPP1R14AQ96A00 147 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 OR51V1Q9H2C8 321 aa18.78■□□□□ 0.6
CDK13-202ENST00000340829 PPIEQ9UNP9 301 aaKnown RBP18.78■□□□□ 0.6
CDK13-202ENST00000340829 SRPRAP08240 638 aaKnown RBP18.77■□□□□ 0.6
CDK13-202ENST00000340829 ABRAXAS2Q15018 415 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 PLET1Q6UQ28 207 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 OAFQ86UD1 273 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 JAZF1Q86VZ6 243 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 SLC15A3Q8IY34 581 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 SLCO3A1Q9UIG8 710 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 TSPAN6O43657 245 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 HCN1O60741 890 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 PSMD4P55036 377 aaKnown RBP18.77■□□□□ 0.6
CDK13-202ENST00000340829 PLEKHS1Q5SXH7 462 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 PRSS58Q8IYP2 241 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 APCDD1Q8J025 514 aa18.77■□□□□ 0.6
CDK13-202ENST00000340829 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.77■□□□□ 0.6
CDK13-202ENST00000340829 YTHDF1Q9BYJ9 559 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms