RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ASTLQ6HA08 431 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 ZNF730Q6ZMV8 503 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 GOLGA7Q7Z5G4 137 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 STK32CQ86UX6 486 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 C1orf210Q8IVY1 113 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 CPSF7Q8N684 471 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 ULBP3Q9BZM4 244 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ACTR10Q9NZ32 417 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 PCDHGA12O60330 932 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 S1PR4O95977 384 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 RUNX1T1Q06455 604 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 EIPR1Q53HC9 387 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 TRIM73Q86UV7 250 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 NATD1Q8N6N6 113 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 RP9Q8TA86 221 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 PTCD3Q96EY7 689 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 HDAC8Q9BY41 377 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 NPHS1O60500 1241 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SIX3O95343 332 aaPredicted RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 SYNGR4O95473 234 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 PROCP04070 461 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 COX4I1P13073 169 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 H2AFXP16104 143 aaPredicted RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 MTTPP55157 894 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 TBPL1P62380 186 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 LGALS3BPQ08380 585 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 EXOC3L1Q86VI1 746 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 CD244Q9BZW8 370 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 ZDHHC5Q9C0B5 715 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SLAMF7Q9NQ25 335 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 TM7SF3Q9NS93 570 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 DKK3Q9UBP4 350 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 HS3ST2Q9Y278 367 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 ZMPSTE24O75844 475 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 CXCR1P25024 350 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 ITGA1P56199 1179 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 MC1RQ01726 317 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 FCHO2Q0JRZ9 810 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 ENPP2Q13822 863 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 VIRMAQ69YN4 1812 aaKnown RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 UBE2J2Q8N2K1 259 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 GSTCDQ8NEC7 633 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 OR5L2Q8NGL0 311 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SLC39A13Q96H72 371 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 IFNGP01579 166 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 IMPDH1P20839 514 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 CD247P20963 164 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 FAM91A1Q658Y4 838 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 DENND6BQ8NEG7 585 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 TEX47Q8TBZ9 253 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 TEFMQ96QE5 360 aaKnown RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 LPAR4Q99677 370 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 RNF121Q9H920 327 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 NEUROD4Q9HD90 331 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SRPK3Q9UPE1 567 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 PLIN3O60664 434 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 IL33O95760 270 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 AGR2O95994 175 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 AHCYP23526 432 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 PSME3P61289 254 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 HMGCS1Q01581 520 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 NSDHLQ15738 373 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 ZBTB49Q6ZSB9 765 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 OR4K14Q8NGD5 310 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SLC22A8Q8TCC7 542 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 SLC29A3Q9BZD2 475 aa12.42□□□□□ -0.42
LIN54-201ENST00000340417 C6orf106Q9H6K1 298 aaPredicted RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 SPIN1Q9Y657 262 aaPredicted RBP12.42□□□□□ -0.42
LIN54-201ENST00000340417 A0A0J9YY10 115 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 JUNP05412 331 aaKnown RBP12.41□□□□□ -0.42
LIN54-201ENST00000340417 C1GALT1C1LP0DN25 315 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 IL4RP24394 825 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 CNR2P34972 360 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 SGSHP51688 502 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 GPR68Q15743 365 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 TNFAIP8L2Q6P589 184 aaPredicted RBP12.41□□□□□ -0.42
LIN54-201ENST00000340417 ERICH5Q6P6B1 374 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 FBXL6Q8N531 539 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 PRODH2Q9UF12 536 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 MAGEB17A8MXT2 336 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 CNOT3O75175 753 aaKnown RBP12.41□□□□□ -0.42
LIN54-201ENST00000340417 MREGQ8N565 214 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 KLKB1P03952 638 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 P04436 131 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 MYL12AP19105 171 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 PTPN4P29074 926 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 KCNC1P48547 511 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 INHBCP55103 352 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 SIGLEC14Q08ET2 396 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 TERF2Q15554 542 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 RNF111Q6ZNA4 994 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 NRROSQ86YC3 692 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 PPM1MQ96MI6 270 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
LIN54-201ENST00000340417 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
LIN54-201ENST00000340417 TGDSO95455 350 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms