RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ARG2P78540 354 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 LONRF1Q17RB8 773 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 CRB2Q5IJ48 1285 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 CCDC137Q6PK04 289 aaKnown RBP18.49■□□□□ 0.55
ITGA4-202ENST00000339307 NDUFAF7Q7L592 441 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 PLD3Q8IV08 490 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 CATSPER1Q8NEC5 780 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 OR1N1Q8NGS0 311 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 GRHL3Q8TE85 626 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 SERPINB12Q96P63 405 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 GPR21Q99679 349 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 DOCK10Q96BY6 2186 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 SPTBN1Q01082 2364 aaKnown RBP18.49■□□□□ 0.55
ITGA4-202ENST00000339307 IGKV1-8A0A0C4DH67 115 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 IDSB3KWA1 339 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 EZRP15311 586 aaKnown RBP18.49■□□□□ 0.55
ITGA4-202ENST00000339307 COILP38432 576 aaPredicted RBP18.49■□□□□ 0.55
ITGA4-202ENST00000339307 MAGEA6P43360 314 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 MFAP5Q13361 173 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 DSG2Q14126 1118 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 SYT16Q17RD7 645 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 MFSD4BQ5TF39 518 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 IGFL2Q6UWQ7 119 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 NEK10Q6ZWH5 1172 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 MAMDC2Q7Z304 686 aaPredicted RBP18.49■□□□□ 0.55
ITGA4-202ENST00000339307 KCNMB4Q86W47 210 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 GIMAP7Q8NHV1 300 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 COG1Q8WTW3 980 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 PBKQ96KB5 322 aa18.49■□□□□ 0.55
ITGA4-202ENST00000339307 PRRC2CQ9Y520 2896 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 SPTAN1Q13813 2472 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 DYTNA2CJ06 578 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 E7ENX8 843 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 H7BY64 318 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 TXNDC9O14530 226 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 HAT1O14929 419 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 WFS1O76024 890 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 LDLRP01130 860 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 MPC1LP0DKB6 136 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 TSFMP43897 325 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 EMP3P54852 163 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ABATP80404 500 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 MPP1Q00013 466 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 TAP2Q03519 686 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 NDUFA9Q16795 377 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ARMC3Q5W041 872 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ATG9BQ674R7 924 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ZNF549Q6P9A3 640 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 FAM180AQ6UWF9 173 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 UBE2R2Q712K3 238 aaPredicted RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 PIWIL4Q7Z3Z4 852 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 CPNE9Q8IYJ1 553 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 SIRT6Q8N6T7 355 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ST6GALNAC3Q8NDV1 305 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 MCUQ8NE86 351 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 CALML6Q8TD86 181 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 BRIX1Q8TDN6 353 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ASB11Q8WXH4 323 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 KCNJ9Q92806 393 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ALKBH8Q96BT7 664 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 MVB12AQ96EY5 273 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 PRAP1Q96NZ9 151 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 OR2A5Q96R48 311 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 LMF1Q96S06 567 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 EBNA1BP2Q99848 306 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 DRC3Q9H069 523 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 SYNPO2LQ9H987 977 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 MKKSQ9NPJ1 570 aaPredicted RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 IARS2Q9NSE4 1012 aaKnown RBP18.48■□□□□ 0.55
ITGA4-202ENST00000339307 C14orf105Q9NVL8 296 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 PLA2G3Q9NZ20 509 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 OSGIN2Q9Y236 505 aa18.48■□□□□ 0.55
ITGA4-202ENST00000339307 ZCWPW2A0A1B0GU75 182 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 HAUS5O94927 633 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 F10P00742 488 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 COX6A1P12074 109 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 ENO3P13929 434 aaPredicted RBP18.47■□□□□ 0.55
ITGA4-202ENST00000339307 AVPR1BP47901 424 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 MAT1AQ00266 395 aaKnown RBP18.47■□□□□ 0.55
ITGA4-202ENST00000339307 HSP90AA5PQ58FG0 334 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 GARNL3Q5VVW2 1013 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 ZNF425Q6IV72 752 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 NAP1L3Q99457 506 aaPredicted RBP18.47■□□□□ 0.55
ITGA4-202ENST00000339307 FBXO5Q9UKT4 447 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 MKL2Q9ULH7 1088 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 DHRS7Q9Y394 339 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 JRKLQ9Y4A0 524 aa18.47■□□□□ 0.55
ITGA4-202ENST00000339307 IGLV3-12A0A075B6K2 115 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 CLDN1O95832 211 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 PRR35P0CG20 571 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 SLC26A3P40879 764 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 B3GNTL1Q67FW5 361 aaPredicted RBP18.46■□□□□ 0.55
ITGA4-202ENST00000339307 ZNF787Q6DD87 383 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 PALM2Q8IXS6 379 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 RASGEF1CQ8N431 466 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 AMER3Q8N944 861 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.46■□□□□ 0.55
ITGA4-202ENST00000339307 FAR1Q8WVX9 515 aa18.46■□□□□ 0.55
ITGA4-202ENST00000339307 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.46■□□□□ 0.55
ITGA4-202ENST00000339307 CCDC177Q9NQR7 707 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms