RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TBC1D10AQ9BXI6 508 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 NUF2Q9BZD4 464 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 TMEM184CQ9NVA4 438 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 GEMIN8Q9NWZ8 242 aaKnown RBP13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 NCDNQ9UBB6 729 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ADGRE2Q9UHX3 823 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 POMT2Q9UKY4 750 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 ARL2BPQ9Y2Y0 163 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 TIMM22Q9Y584 194 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 KLK4Q9Y5K2 254 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 WDR87Q6ZQQ6 2873 aa13.99□□□□□ -0.17
NIPAL3-202ENST00000339255 MANBAO00462 879 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DUX1O43812 170 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DIAPH2O60879 1101 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 SKAP2O75563 359 aaPredicted RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CD22P20273 847 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 GSTM2P28161 218 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DUSP3P51452 185 aaPredicted RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 ARFIP2P53365 341 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 PHEXP78562 749 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 BTKQ06187 659 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 SLBPQ14493 270 aaKnown RBP eCLIP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CSRP2Q16527 193 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CATSPEREQ5SY80 951 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 ACAD11Q709F0 780 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 MAVSQ7Z434 540 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 FAM129CQ86XR2 697 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DDIASQ8IXT1 998 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 LAS2Q8IYD9 372 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CACNA2D3Q8IZS8 1091 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CARFQ8N187 725 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 EID2Q8N6I1 236 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 FLVCR1-AS1Q8TAF5 88 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 C10orf82Q8WW14 230 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 RSC1A1Q92681 617 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 USP7Q93009 1102 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 SEC16BQ96JE7 1060 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CD180Q99467 661 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DPH7Q9BTV6 452 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 TMEM120AQ9BXJ8 343 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 KCNK13Q9HB14 408 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 EPHA6Q9UF33 1036 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 A0A0J9YY10 115 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 FFAR3O14843 346 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 GPR42O15529 346 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CKMT1AP12532 417 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 HSD3B1P14060 373 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 HSD3B2P26439 372 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 VARSP26640 1264 aaKnown RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 ALDH4A1P30038 563 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 REEP5Q00765 189 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 RELAQ04206 551 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 TMIGD1Q6UXZ0 262 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 DBX2Q6ZNG2 339 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 GBP7Q8N8V2 638 aaPredicted RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CCDC197Q8NCU1 140 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 TTLQ8NG68 377 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 OR7G3Q8NG95 312 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 ZUFSPQ96AP4 578 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 THOC1Q96FV9 657 aaKnown RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 AHCYL2Q96HN2 611 aaKnown RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 MAELQ96JY0 434 aaKnown RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 NT5DC2Q9H857 520 aa13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 CUEDC1Q9NWM3 386 aaPredicted RBP13.98□□□□□ -0.17
NIPAL3-202ENST00000339255 IGHV1OR21-1A0A087WYE8 117 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 IGKV1-8A0A0C4DH67 115 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 LY6G6EA0A0G2JKS1 128 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TRBC2A0A5B9 178 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SERTM1A2A2V5 107 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 EME2A4GXA9 379 aaPredicted RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 H7BY64 318 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 PIP5K1BO14986 540 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TNFSF14O43557 240 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 RRP9O43818 475 aaKnown RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 JUNP05412 331 aaKnown RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 EZRP15311 586 aaKnown RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TYRP1P17643 537 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SERPINB3P29508 390 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 PIK3CBP42338 1070 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 IDH3AP50213 366 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 CSNK1G2P78368 415 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 CSTF3Q12996 717 aaKnown RBP13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 PROX2Q3B8N5 592 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 XKR7Q5GH72 579 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 KIAA1614Q5VZ46 1190 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 ZNF425Q6IV72 752 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TRIM46Q7Z4K8 759 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 ADCK2Q7Z695 626 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SPRED1Q7Z699 444 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 ACTRT2Q8TDY3 377 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 CCDC74AQ96AQ1 378 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 ZDHHC12Q96GR4 267 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 PRAP1Q96NZ9 151 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 CCDC28BQ9BUN5 200 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 EDEM2Q9BV94 578 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SARGQ9BW04 601 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 BRF2Q9HAW0 419 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 SLC6A20Q9NP91 592 aa13.97□□□□□ -0.17
NIPAL3-202ENST00000339255 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms