RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 PHF2O75151 1096 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 JRKO75564 520 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 FKBP9O95302 570 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 MPC1LP0DKB6 136 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 COL8A1P27658 744 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 IMPA1P29218 277 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 CARSP49589 748 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 EMP2P54851 167 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 DHX9Q08211 1270 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ZXDCQ2QGD7 858 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 RBM20Q5T481 1227 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ATG9BQ674R7 924 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 UBE2R2Q712K3 238 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ADCK2Q7Z695 626 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ARHGEF39Q8N4T4 335 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 CSNK1A1LQ8N752 337 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 DNAJB14Q8TBM8 379 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ACTRT1Q8TDG2 376 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ALKBH8Q96BT7 664 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 MMABQ96EY8 250 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 ILKAPQ9H0C8 392 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 CCDC68Q9H2F9 335 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 PLAC1Q9HBJ0 212 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 PLA2G3Q9NZ20 509 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 TRPC4Q9UBN4 977 aa12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 COPG1Q9Y678 874 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-201ENST00000338427 USP27XA6NNY8 438 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 ZBTB14O43829 449 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 NRDCO43847 1150 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 LCMT2O60294 686 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 F10P00742 488 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 IGHEP01854 428 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 AHSGP02765 367 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 FBLP22087 321 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 ST13P50502 369 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 CDKN2DP55273 166 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 OCA2Q04671 838 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 EEF1A2Q05639 463 aaKnown RBP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 ARHGAP19Q14CB8 494 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 MUM1Q2TAK8 710 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 TTLL9Q3SXZ7 439 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 TUBB8Q3ZCM7 444 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 THEMIS2Q5TEJ8 643 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 PAQR3Q6TCH7 311 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 NEK10Q6ZWH5 1172 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 PRSS41Q7RTY9 318 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 KCNMB4Q86W47 210 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 HPS6Q86YV9 775 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 PPIL6Q8IXY8 311 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 IQCKQ8N0W5 287 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 AMER3Q8N944 861 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 ATG10Q9H0Y0 220 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 FAM114A2Q9NRY5 505 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 SEMA3GQ9NS98 782 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 ZNF282Q9UDV7 671 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 SNX12Q9UMY4 172 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 PDE10AQ9Y233 779 aa12.71□□□□□ -0.37
NUDCD3-201ENST00000338427 FEZF1A0PJY2 475 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 DNAJB6O75190 326 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 ALPPP05187 535 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 IVDP26440 423 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 SLC26A3P40879 764 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 SKIV2L2P42285 1042 aaKnown RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 BBS9Q3SYG4 887 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 AGAP7PQ5VUJ5 663 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 PRMT9Q6P2P2 845 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 FBXO15Q8NCQ5 510 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 C2CD4AQ8NCU7 369 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 OR9A4Q8NGU2 314 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 PSMF1Q92530 271 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 KCNJ9Q92806 393 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 CNDP1Q96KN2 507 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 AGAP4Q96P64 663 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 LHPPQ9H008 270 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 PLEKHB1Q9UF11 243 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 ASIC3Q9UHC3 531 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 ERRFI1Q9UJM3 462 aaPredicted RBP12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 IKZF3Q9UKT9 509 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 VPS9D1Q9Y2B5 631 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 MAST4O15021 2626 aa12.7□□□□□ -0.38
NUDCD3-201ENST00000338427 IGLV3-12A0A075B6K2 115 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 IGHV3-20A0A0C4DH32 117 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 IDSB3KWA1 339 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 VPS26AO75436 327 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 COX6A1P12074 109 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 HSD17B2P37059 387 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 NAE1Q13564 534 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 CRYMQ14894 314 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 PHKG1Q16816 387 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 B3GNTL1Q67FW5 361 aaPredicted RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 TRMT10BQ6PF06 316 aaKnown RBP12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 IGFL2Q6UWQ7 119 aa12.69□□□□□ -0.38
NUDCD3-201ENST00000338427 VN1R4Q7Z5H5 301 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms