RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 RIIAD1A6NNX1 92 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 GADD45GO95257 159 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 THEGLP0DJG4 465 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 VSX2P58304 361 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 RANBP10Q6VN20 620 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 PLA2G15Q8NCC3 412 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 ARMC5Q96C12 935 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CENPNQ96H22 339 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CADM1Q9BY67 442 aaKnown RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 DENND2DQ9H6A0 471 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF334Q9HCZ1 680 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CFL2Q9Y281 166 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF860A6NHJ4 632 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 RFPL1O75677 317 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CCNB2O95067 398 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 HNRNPKP61978 463 aaKnown RBP eCLIP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 RPP38P78345 283 aaKnown RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 FRMD7Q6ZUT3 714 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 USP53Q70EK8 1073 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 OAFQ86UD1 273 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CBR4Q8N4T8 237 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 SUN3Q8TAQ9 357 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 PAIP1Q9H074 479 aaKnown RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 KCNH6Q9H252 994 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF576Q9H609 170 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 BHMG1C9JSJ3 638 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CLCN4P51793 760 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 UFM1P61960 85 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 SLC7A9P82251 487 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 HNRNPA1L2Q32P51 320 aaKnown RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 MPP7Q5T2T1 576 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 MGME1Q9BQP7 344 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CHID1Q9BWS9 393 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 MVB12BQ9H7P6 319 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 PCDHGA2Q9Y5H1 932 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 KLF11O14901 512 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 THRBP10828 461 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 ATP12AP54707 1039 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CCINQ13939 588 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 CPXM2Q8N436 756 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 OR9I1Q8NGQ6 314 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 LRRC58Q96CX6 371 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 MMABQ96EY8 250 aaPredicted RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 DNMT3BQ9UBC3 853 aaKnown RBP14.57□□□□□ -0.08
C9orf47-201ENST00000334490 P2RX2Q9UBL9 471 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 GIMAP2Q9UG22 337 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 POMPQ9Y244 141 aa14.57□□□□□ -0.08
C9orf47-201ENST00000334490 GLOD5A6NK44 160 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ALDOAP04075 364 aaKnown RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ASGR2P07307 311 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 MPC1LP0DKB6 136 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 CD1DP15813 335 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 SLC7A1P30825 629 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PGGT1BP53609 377 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 LACTB2Q53H82 288 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 TMEM214Q6NUQ4 689 aaKnown RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 RPTNQ6XPR3 784 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 IPCEF1Q8WWN9 437 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 CXCL16Q9H2A7 254 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 KCNN2Q9H2S1 579 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 FAM170BA6NMN3 283 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 BCKDKO14874 412 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PIK3CBP42338 1070 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ID2Q02363 134 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 MAPK11Q15759 364 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 TRIM71Q2Q1W2 868 aaKnown RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 CEP78Q5JTW2 689 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 SCML4Q8N228 414 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PARP8Q8N3A8 854 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 AMER2Q8N7J2 671 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 OSBPL7Q9BZF2 842 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PCDHAC1Q9H158 963 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 Q9N2J8 555 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ZNF624Q9P2J8 865 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 SCML1Q9UN30 329 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 MYH10P35580 1976 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ZBTB11O95625 1053 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 AGR2O95994 175 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PGRP06401 933 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 C1GALT1C1LP0DN25 315 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ALOX12P18054 663 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 RPS9P46781 194 aaKnown RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 RAB41Q5JT25 222 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 SPANXN4Q5MJ08 99 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 METTL27Q8N6F8 245 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 LRTOMTQ8WZ04 291 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 ZHX1-C8orf76Q96EF9 292 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 TGM7Q96PF1 710 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 CLK4Q9HAZ1 481 aaKnown RBP14.56□□□□□ -0.08
C9orf47-201ENST00000334490 C8orf4Q9NR00 106 aa14.56□□□□□ -0.08
C9orf47-201ENST00000334490 CD68P34810 354 aaPredicted RBP14.55□□□□□ -0.08
C9orf47-201ENST00000334490 LPAL2Q16609 132 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 SLC2A7Q6PXP3 512 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 NUP54Q7Z3B4 507 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 UXS1Q8NBZ7 420 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 ART5Q96L15 291 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 GPATCH1Q9BRR8 931 aaKnown RBP14.55□□□□□ -0.08
C9orf47-201ENST00000334490 SLC39A3Q9BRY0 314 aa14.55□□□□□ -0.08
C9orf47-201ENST00000334490 STRADBQ9C0K7 418 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms