RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 TMEM14AQ9Y6G1 99 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 LACTBL1A8MY62 500 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 HTR1AP08908 422 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 CPN2P22792 545 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 KCNC4Q03721 635 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 HSPA14Q0VDF9 509 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 SCARF1Q14162 830 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 PROKR2Q8NFJ6 384 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 P2RY11Q96G91 374 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 RAD9AQ99638 391 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 EFCAB11Q9BUY7 163 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 ASPNQ9BXN1 380 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 GLOD4Q9HC38 313 aa5.39□□□□□ -1.55
PTPRB-202ENST00000334414 ARL5CA6NH57 179 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GRM6O15303 877 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 S100A8P05109 93 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ELFN1P0C7U0 828 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ABCG1P45844 678 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GRIK4Q16099 956 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM205Q6UW68 189 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SKA3Q8IX90 412 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 LGI4Q8N135 537 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DEDD2Q8WXF8 326 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 AGO3Q9H9G7 860 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RAB9BQ9NP90 201 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DCCP43146 1447 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PIP5K1BO14986 540 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 KLRC4O43908 158 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RARRES1P49788 294 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TAS2R20P59543 309 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MC2RQ01718 297 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GBE1Q04446 702 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ALG10BQ5I7T1 473 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 LCLAT1Q6UWP7 414 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GSG1LQ6UXU4 331 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SSX6Q7RTT6 188 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SYNE4Q8N205 404 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MARCH10Q8NA82 808 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 LIN37Q96GY3 246 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MCMBPQ9BTE3 642 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SLC2A11Q9BYW1 496 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SOHLH2Q9NX45 425 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ERVW-1Q9UQF0 538 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ERVK-19Q9WJR5 959 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SPATA31A3Q5VYP0 1347 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ADH1CP00326 375 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 SBK2P0C263 348 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GJA1P17302 382 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MMP8P22894 467 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 YBEYP58557 167 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 HERV-K104P61576 105 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 CDK3Q00526 305 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PTPN20Q4JDL3 420 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RAET1GQ6H3X3 334 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BBS10Q8TAM1 723 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PIWIL1Q96J94 861 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 DERL2Q9GZP9 239 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MFSD1Q9H3U5 465 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 RPF2Q9H7B2 306 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 A0A075B6Q4 140 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 A0A0J9YVX5 310 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TCRBV5S4A2TA0A5A2 114 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FAM149AA5PLN7 773 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 K7EPI3 171 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MATN3O15232 486 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 P2RX6O15547 441 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GMDSO60547 372 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NTSR2O95665 410 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 APOC3P02656 99 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 C2P06681 752 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PKLRP30613 574 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PROX2Q3B8N5 592 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NDUFAF5Q5TEU4 345 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 MBLAC2Q68D91 279 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TMPRSS11BQ86T26 416 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 COX18Q8N8Q8 333 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 GPR156Q8NFN8 814 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ING5Q8WYH8 240 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PCDHB18PQ96TA0 734 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 PIP5K1AQ99755 562 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 OMDQ99983 421 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM121BQ9BXQ6 578 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TMEM59LQ9UK28 342 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ARL5AQ9Y689 179 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BHMG1C9JSJ3 638 aaPredicted RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 J3QR89 54 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 COL6A1P12109 1028 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ARL3P36405 182 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ORC1Q13415 861 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 ATG9BQ674R7 924 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TRIM46Q7Z4K8 759 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 BEST3Q8N1M1 668 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 FTMTQ8N4E7 242 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 C2orf15Q8WU43 125 aaKnown RBP5.38□□□□□ -1.55
PTPRB-202ENST00000334414 HSH2DQ96JZ2 352 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 OR10A4Q9H209 315 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 TOR3AQ9H497 397 aa5.38□□□□□ -1.55
PTPRB-202ENST00000334414 NRCAMQ92823 1304 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms