RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 CRB3Q9BUF7 120 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 ILKAPQ9H0C8 392 aaPredicted RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 PCYOX1Q9UHG3 505 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 SNX12Q9UMY4 172 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 RUVBL1Q9Y265 456 aaKnown RBP12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 PCDHGA10Q9Y5H3 936 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 MAD1L1Q9Y6D9 718 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 MAU2Q9Y6X3 613 aa12.93□□□□□ -0.34
GTF3C6-201ENST00000329970 KCNE1BA0A087WTH5 132 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 BLACEA4D250 179 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 SMAPO00193 183 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 HAUS5O94927 633 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 EIF2S1P05198 315 aaKnown RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 CYC1P08574 325 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 FDXRP22570 491 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 IMPA1P29218 277 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 TSFMP43897 325 aaKnown RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 SP140Q13342 867 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 CUL1Q13616 776 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 CRYMQ14894 314 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 HSP90AA5PQ58FG0 334 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 IRAK1BP1Q5VVH5 260 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 B3GNTL1Q67FW5 361 aaPredicted RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 KIAA0408Q6ZU52 694 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 DTWD1Q8N5C7 304 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 METTL27Q8N6F8 245 aaPredicted RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 CSNK1A1LQ8N752 337 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 RERGQ96A58 199 aaPredicted RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 LMF1Q96S06 567 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 PCBD2Q9H0N5 130 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 SYNPO2LQ9H987 977 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 ZBTB20Q9HC78 741 aaPredicted RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 MKKSQ9NPJ1 570 aaPredicted RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 TMEM184CQ9NVA4 438 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 LUZP4Q9P127 313 aa12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 TSR3Q9UJK0 312 aaKnown RBP12.92□□□□□ -0.34
GTF3C6-201ENST00000329970 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 LOC102723996A0A087X1L8 192 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 MASP2O00187 686 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 MAP2K7O14733 419 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 SLC16A5O15375 505 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 AGFG2O95081 481 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CBX6O95503 412 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 DDAH2O95865 285 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 C8GP07360 202 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 ACPPP15309 386 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 TCP1P17987 556 aaKnown RBP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CCND1P24385 295 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 RGS4P49798 205 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 MPP1Q00013 466 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 TIAL1Q01085 375 aaKnown RBP eCLIP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 PPP1R7Q15435 360 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 SPANXN3Q5MJ09 141 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 UBE2R2Q712K3 238 aaPredicted RBP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CUZD1Q86UP6 607 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 AMER3Q8N944 861 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 MCOLN3Q8TDD5 553 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 THAP11Q96EK4 314 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CCDC138Q96M89 665 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 FAM129AQ9BZQ8 928 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 DRC3Q9H069 523 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 EPS8L2Q9H6S3 715 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 CCDC177Q9NQR7 707 aaPredicted RBP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 ASF1BQ9NVP2 202 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 TAS2R13Q9NYV9 303 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 TRMT6Q9UJA5 497 aaKnown RBP12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 C3orf18Q9UK00 162 aa12.91□□□□□ -0.34
GTF3C6-201ENST00000329970 H0YIG0 161 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 HAT1O14929 419 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 FOXS1O43638 330 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 F7P08709 466 aaPredicted RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 COX6A1P12074 109 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 IVDP26440 423 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 RPS15AP62244 130 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 DHX9Q08211 1270 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 Q0VFX4 171 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 HKDC1Q2TB90 917 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 VWA2Q5GFL6 755 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 RPUSD3Q6P087 351 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 ISLR2Q6UXK2 745 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 SHISA6Q6ZSJ9 500 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 SYDE1Q6ZW31 735 aaPredicted RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 NDUFAF7Q7L592 441 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 PIWIL4Q7Z3Z4 852 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 CISD2Q8N5K1 135 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 C19orf60Q96EN9 201 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 THOC3Q96J01 351 aaKnown RBP12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 RUNDC3BQ96NL0 473 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 PARVBQ9HBI1 364 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 AGPAT4Q9NRZ5 378 aa12.9□□□□□ -0.34
GTF3C6-201ENST00000329970 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms