RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CAPN7Q9Y6W3 813 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 PDZK1P1A8MUH7 402 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 BRINP1O60477 761 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 WDR47O94967 919 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 RPN2P04844 631 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 EBLN1P0CF75 366 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 T-ENOLP0DO92 83 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 HGFP14210 728 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 NCF2P19878 526 aaPredicted RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 CCR10P46092 362 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 PDCD2Q16342 344 aaPredicted RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 RBBP7Q16576 425 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 PHKG1Q16816 387 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 SMU1Q2TAY7 513 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 METRNLQ641Q3 311 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 UNC5DQ6UXZ4 953 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 CHSY3Q70JA7 882 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 SLITRK4Q8IW52 837 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 AGR3Q8TD06 166 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 C19orf60Q96EN9 201 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 NRTNQ99748 197 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 NRSN2Q9GZP1 204 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 MMADHCQ9H3L0 296 aaPredicted RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 CCDC86Q9H6F5 360 aaKnown RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 SEMA4BQ9NPR2 832 aaPredicted RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 RIC8BQ9NVN3 520 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 ACSL5Q9ULC5 683 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 SATB2Q9UPW6 733 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 CFAP20Q9Y6A4 193 aaKnown RBP15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 AK5Q9Y6K8 562 aa15.88■□□□□ 0.13
PDLIM1-201ENST00000329399 TAPBPO15533 448 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 TLX3O43711 291 aaPredicted RBP15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 UGDHO60701 494 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 THRAP10827 490 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 XRCC1P18887 633 aaPredicted RBP15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 IDSP22304 550 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 GPR3P46089 330 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 AGTR2P50052 363 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 CCNG1P51959 295 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 PCDH1Q08174 1060 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 DMPKQ09013 629 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 HERC3Q15034 1050 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 MAPRE2Q15555 327 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 VWA5B1Q5TIE3 1220 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 GOLGA7Q7Z5G4 137 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 PARP9Q8IXQ6 854 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 ARHGAP24Q8N264 748 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 RCBTB1Q8NDN9 531 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 JPH3Q8WXH2 748 aaPredicted RBP15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 DLG3Q92796 817 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 ATP6V1E2Q96A05 226 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC29A3Q9BZD2 475 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 IPPKQ9H8X2 491 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 ZBTB26Q9HCK0 441 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 TRPS1Q9UHF7 1281 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 RAXQ9Y2V3 346 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 DNAJC15Q9Y5T4 150 aa15.87■□□□□ 0.13
PDLIM1-201ENST00000329399 KIR2DS5A0A0G2JLQ3 304 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 A0A0G2JNG1 304 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 H0YHG0 523 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 KIR2DS3K7RE56 304 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 GUCA1CO95843 209 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 EPHA3P29320 983 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 PDHA2P29803 388 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 HSD17B2P37059 387 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC6A12P48065 614 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 KIR2DS5Q14953 304 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 RPE65Q16518 533 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 C3orf38Q5JPI3 329 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 NXNQ6DKJ4 435 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 OGFOD2Q6N063 350 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 DUS1LQ6P1R4 473 aaKnown RBP15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 WASH2PQ6VEQ5 465 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 LARP4Q71RC2 724 aaKnown RBP eCLIP15.86■□□□□ 0.131e-10■■■■□ 24.2
PDLIM1-201ENST00000329399 SPATA19Q7Z5L4 167 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 MILR1Q7Z6M3 343 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 PROSER1Q86XN7 944 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 SPNS2Q8IVW8 549 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 CFAP206Q8IYR0 622 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 TEX9Q8N6V9 391 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 TWIST2Q8WVJ9 160 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 MOCOSQ96EN8 888 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 NSUN5Q96P11 429 aaKnown RBP15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 OR52B2Q96RD2 323 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 INSM2Q96T92 566 aaPredicted RBP15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC38A3Q99624 504 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 BTBD10Q9BSF8 475 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 SHCBP1LQ9BZQ2 653 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 NOL11Q9H8H0 719 aaKnown RBP15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 SLC40A1Q9NP59 571 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 WASH6PQ9NQA3 447 aa15.86■□□□□ 0.13
PDLIM1-201ENST00000329399 IGHV5-10-1A0A0J9YXX1 117 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 UBDO15205 165 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 CCNT2O60583 730 aaKnown RBP15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 CPNE6O95741 557 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 HSPA7P48741 367 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 MRPL19P49406 292 aaKnown RBP15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 GABREP78334 506 aa15.85■□□□□ 0.13
PDLIM1-201ENST00000329399 BIRC2Q13490 618 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms